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The map label for this gene is ygfZ [C]

Identifier: 17546501

GI number: 17546501

Start: 1917697

End: 1918737

Strand: Reverse

Name: ygfZ [C]

Synonym: RSc1782

Alternate gene names: 17546501

Gene position: 1918737-1917697 (Counterclockwise)

Preceding gene: 17546508

Following gene: 17546500

Centisome position: 51.63

GC content: 69.74

Gene sequence:

>1041_bases
ATGAATGACGTCTTCCAGGATTTCGTCGATACGCTCAGCTTTCCCCCGCTCGACGTGCAGTTCACCCATGCCGCGCAAGG
CAGCGTGCTGTGCGCGCCGACCAACCTGGCCCGCATTGCCGTCGAAGGCGCCGATGCGGCCGAATTCCTCCACAACCAGC
TGACCAACGCGGTCACCGGCCTGGGCCTGGCACAGGCGCGGCCGGCCGGCTACTGCTCGCCCAAGGGACGGCTGCTGGCC
ACGCTGCTCCTGTGGCGCCAGGCCGATACCATCGTGCTGCAGACCGACAAGCTGGTCGCGCCCGCGATCACCAAGCGCCT
GTCGATGTTCGTGCTGCGCGCCAAGGCCAAGCTGCGCCCGATGGACGAGTTCATCGCCATCACCGTCGCCGGGCCGGACG
CGGCCGATGCGCTGCGCGCGGCCGGCGCCGTGTTGCCCGAATCCGATGCGCCCTATGCCGTCGCGCAGCAGTCCGCCACG
GTGGGCCAGCAGGTCGGCGCGGTGGTCCGCCTGCCGGATGCCGGCAACCGGGCGCGCTACCAGTGGCTGGTGCACGCGGA
GCACTTCCAGCACGCCTGGAAGACGCTGTCGTCGCGGCTGGCGCTGATCGGCACCGAAGTGTGGGACTGGCTCGGCCTGC
AGGCGGGTGTGCCATCGATCACGCTGTCGACGCAAGAGCAGTTCGTGCCGCAGATGGTGAACCTGGAGCTGATCGGCGGC
GTGGATTTCCGCAAGGGCTGCTATCCGGGCCAGGAGGTGGTGGCGCGCAGCCAGTACCGCGGCACGCTCAAGCGGCGCAT
GCAGCGGGCGCACGTCGATGCGCCCACCTCGGCCGGCGCCGAAGTCTTCAGCGCGGCCGACCCGAACCAGCCATGCGGCA
TGGTGGTCAACGCCGCGATGGCGCCGGACGGCGGCACCGACCTGCTGGTCGAGCTCAAGCTGGATGCGCTCGACACGGTC
ATCCACCTGGCCACCGCCGATGGGCCGGTGCTGACGCTGCAACGCCTGCCGTACGCGATTCCCGTCGCGGAAAGCGCCTG
A

Upstream 100 bases:

>100_bases
CGCCGGTCTTGCCCGCACTTGAAAGAGGGTTGAGCGCGCCCCAGATGCACGCCGAACAGCCCCATATAATACCGGGTCAA
TCTCCGGCCGCCTGCATACC

Downstream 100 bases:

>100_bases
CAACCGACACGCATCGCGAGCCGCCCATGGCCGACCATCTGTTCGTCTACTTCCGCATCGCCGAGCGCGATGCCGCGGCC
GCCCTGCCGCGCTGGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNDVFQDFVDTLSFPPLDVQFTHAAQGSVLCAPTNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLA
TLLLWRQADTIVLQTDKLVAPAITKRLSMFVLRAKAKLRPMDEFIAITVAGPDAADALRAAGAVLPESDAPYAVAQQSAT
VGQQVGAVVRLPDAGNRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLGLQAGVPSITLSTQEQFVPQMVNLELIGG
VDFRKGCYPGQEVVARSQYRGTLKRRMQRAHVDAPTSAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTV
IHLATADGPVLTLQRLPYAIPVAESA

Sequences:

>Translated_346_residues
MNDVFQDFVDTLSFPPLDVQFTHAAQGSVLCAPTNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLA
TLLLWRQADTIVLQTDKLVAPAITKRLSMFVLRAKAKLRPMDEFIAITVAGPDAADALRAAGAVLPESDAPYAVAQQSAT
VGQQVGAVVRLPDAGNRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLGLQAGVPSITLSTQEQFVPQMVNLELIGG
VDFRKGCYPGQEVVARSQYRGTLKRRMQRAHVDAPTSAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTV
IHLATADGPVLTLQRLPYAIPVAESA
>Mature_346_residues
MNDVFQDFVDTLSFPPLDVQFTHAAQGSVLCAPTNLARIAVEGADAAEFLHNQLTNAVTGLGLAQARPAGYCSPKGRLLA
TLLLWRQADTIVLQTDKLVAPAITKRLSMFVLRAKAKLRPMDEFIAITVAGPDAADALRAAGAVLPESDAPYAVAQQSAT
VGQQVGAVVRLPDAGNRARYQWLVHAEHFQHAWKTLSSRLALIGTEVWDWLGLQAGVPSITLSTQEQFVPQMVNLELIGG
VDFRKGCYPGQEVVARSQYRGTLKRRMQRAHVDAPTSAGAEVFSAADPNQPCGMVVNAAMAPDGGTDLLVELKLDALDTV
IHLATADGPVLTLQRLPYAIPVAESA

Specific function: Folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA-modifying ygfZ family [H]

Homologues:

Organism=Escherichia coli, GI1789265, Length=314, Percent_Identity=27.7070063694268, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 37006; Mature: 37006

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVFQDFVDTLSFPPLDVQFTHAAQGSVLCAPTNLARIAVEGADAAEFLHNQLTNAVTG
CCHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHC
LGLAQARPAGYCSPKGRLLATLLLWRQADTIVLQTDKLVAPAITKRLSMFVLRAKAKLRP
CCHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
MDEFIAITVAGPDAADALRAAGAVLPESDAPYAVAQQSATVGQQVGAVVRLPDAGNRARY
CCCEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEE
QWLVHAEHFQHAWKTLSSRLALIGTEVWDWLGLQAGVPSITLSTQEQFVPQMVNLELIGG
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCEEEECC
VDFRKGCYPGQEVVARSQYRGTLKRRMQRAHVDAPTSAGAEVFSAADPNQPCGMVVNAAM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEE
APDGGTDLLVELKLDALDTVIHLATADGPVLTLQRLPYAIPVAESA
CCCCCCEEEEEEEHHHHHHHHHEECCCCCEEEHHHCCEEECCCCCC
>Mature Secondary Structure
MNDVFQDFVDTLSFPPLDVQFTHAAQGSVLCAPTNLARIAVEGADAAEFLHNQLTNAVTG
CCHHHHHHHHHHCCCCCCEEEECCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHC
LGLAQARPAGYCSPKGRLLATLLLWRQADTIVLQTDKLVAPAITKRLSMFVLRAKAKLRP
CCHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
MDEFIAITVAGPDAADALRAAGAVLPESDAPYAVAQQSATVGQQVGAVVRLPDAGNRARY
CCCEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEE
QWLVHAEHFQHAWKTLSSRLALIGTEVWDWLGLQAGVPSITLSTQEQFVPQMVNLELIGG
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCEEEECC
VDFRKGCYPGQEVVARSQYRGTLKRRMQRAHVDAPTSAGAEVFSAADPNQPCGMVVNAAM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEE
APDGGTDLLVELKLDALDTVIHLATADGPVLTLQRLPYAIPVAESA
CCCCCCEEEEEEEHHHHHHHHHEECCCCCEEEHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA