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The map label for this gene is yjeF [H]

Identifier: 17546439

GI number: 17546439

Start: 1839669

End: 1841264

Strand: Reverse

Name: yjeF [H]

Synonym: RSc1720

Alternate gene names: 17546439

Gene position: 1841264-1839669 (Counterclockwise)

Preceding gene: 17546442

Following gene: 17546438

Centisome position: 49.54

GC content: 76.13

Gene sequence:

>1596_bases
ATGTCCGCTCACCCTACCTGGCGCGACGTCCTCACGGACGGCATCCTCGCCGAACGCCATGGCGCCGACCTGCTGTTCGG
CAGCGCCGCTGTCCGCGCGCTCGAAACCGCCGCCTACCGCGCGCTCGCGCCCTTCACGCTGATGGCCCGCGCCGGCGAGG
CCGCCGCCGACTGGCTGCAGGCGCGCGCGCCGCGCGGCCATCTGCTGCTGGTTGCCGGCCCGGGCAACAACGGCGGCGAT
GCGCTGGTCGCCGCCACCGCGCTGCACGAGGCCGGGCGCACCGTCACGGTCTGGCTTGCCGCCGACCCGGCCCGCCTGCC
CGACGACGCCCGCCGCGCCTGGACCGAAGCCCGCGCGGCCCACGTCCCGATCGAAATCCTGCACGCGCCCGCGTCTGTCC
CCGCCACCGTCACGGCCATCGTCGACGGGCTGTTCGGGATCGGCCTGGCGCGGCCGCTCGCCGGGCTGCATGCCGCGCTG
GTCGAGACCCTCAACGGCAGCGGACTGCCCGCCTACGCACTCGACATCCCGTCCGGCCTGTCCGGCGACACGGGCCAGCC
ACCCGCGCCGGATTCGCCGGTGGTGCGTGCGCGCGCCACGCTCACTTTCCTGGTCGCCAAGCCCGGGCTGCTCACCGGCG
CGGGCCGCGACGCCACCGGCGATCTCGCCCTGGCCGACCTGCTGGCCGCCCAGCCCGCCTACGACGGCGTGGTGGAGGCC
GACGCGCTGGTCAACGCGCCGGCGCGCTGGCTCGCTCACCTGCCGCGGCGGCGCCACGACGGCCATAAGGGGACGTACGG
CAGCGTCGCCGTCGTCGGCGGCGCGCACGGGATGGTCGGCGCGCCGCTGCTGTCGGCGCGCGGCGCGCTGCACCTGGGCG
CCGGCAAGGTCCACGTGGTCTCGCTGGCCGACGACGCGCCGCGCGTGGATTTCGCGCAGCCCGAACTGATGCTGCACACG
TGGGGCACCCTGGACCTGGGCGGCATGCAGGCGCTCGCCGTCGGCCCCGGCATGGGCACCGGCAAGGACGCCTACGAGGC
GCTGGACCACCTGCTCGACCGCATGCTGCCCGCGCGCATCGCCGCCGTCTTCGACGCTGACGCGCTCAACCTCTTTGCCC
GTGCCCCGGCCCTGCTCACCCGCCTGACGCGGCTTGCCTCCGGCGGCGCGCCCGTCGTGCTGACACCGCATCCGCTCGAA
GCCGCGCGCCTGCTCGACACCGACGCCCCCACCGTGCAGCGCGATCGACTGGCCGCGGCCCAGGCCCTGGTCAACCGCTG
CGGCGCGGTGGTCGTGCTCAAGGGCTCGGGCACCGTCGTCGCCGCGCCGGGCGTACCGCCGACCGTCAACCCCACCGGCA
ACGGCAGCCTGGCCACCGGCGGCACCGGCGACGTGCTGACCGGCATGATCGGCGCCTTGCTGGCGCAGGGCGTGCCGGCG
CGCGAAGCGGCGCTGGCGGCCGTCTGGCTGCACGGCCGCGCCGCCGATGACCTCGTCGCCGCCGGCGAAGGCCCCATCGG
GCTCCATGCCGGCGAGCTGTGCGCACCGGCGCGCCGCGCCCTCAACGGGCTGCTGAAATCAGACGCCTACCCATAG

Upstream 100 bases:

>100_bases
TCGAAGAGGACGACGACTTGGACATGCGTGACTCGCGGGCAGAAAAGGATGGCAACGCCAACTATTGTAAGAGAATCGAT
CGCCATCTCCGCCCCCCATT

Downstream 100 bases:

>100_bases
AGCACCCGCGCGGTGCGCCGTTATACTGCACATTCGTTTTCCCACGCCGACCCGCCGTATGCCCACCGCCCTTCCCGCCT
GGCAGTCCCTGTCGCAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSAHPTWRDVLTDGILAERHGADLLFGSAAVRALETAAYRALAPFTLMARAGEAAADWLQARAPRGHLLLVAGPGNNGGD
ALVAATALHEAGRTVTVWLAADPARLPDDARRAWTEARAAHVPIEILHAPASVPATVTAIVDGLFGIGLARPLAGLHAAL
VETLNGSGLPAYALDIPSGLSGDTGQPPAPDSPVVRARATLTFLVAKPGLLTGAGRDATGDLALADLLAAQPAYDGVVEA
DALVNAPARWLAHLPRRRHDGHKGTYGSVAVVGGAHGMVGAPLLSARGALHLGAGKVHVVSLADDAPRVDFAQPELMLHT
WGTLDLGGMQALAVGPGMGTGKDAYEALDHLLDRMLPARIAAVFDADALNLFARAPALLTRLTRLASGGAPVVLTPHPLE
AARLLDTDAPTVQRDRLAAAQALVNRCGAVVVLKGSGTVVAAPGVPPTVNPTGNGSLATGGTGDVLTGMIGALLAQGVPA
REAALAAVWLHGRAADDLVAAGEGPIGLHAGELCAPARRALNGLLKSDAYP

Sequences:

>Translated_531_residues
MSAHPTWRDVLTDGILAERHGADLLFGSAAVRALETAAYRALAPFTLMARAGEAAADWLQARAPRGHLLLVAGPGNNGGD
ALVAATALHEAGRTVTVWLAADPARLPDDARRAWTEARAAHVPIEILHAPASVPATVTAIVDGLFGIGLARPLAGLHAAL
VETLNGSGLPAYALDIPSGLSGDTGQPPAPDSPVVRARATLTFLVAKPGLLTGAGRDATGDLALADLLAAQPAYDGVVEA
DALVNAPARWLAHLPRRRHDGHKGTYGSVAVVGGAHGMVGAPLLSARGALHLGAGKVHVVSLADDAPRVDFAQPELMLHT
WGTLDLGGMQALAVGPGMGTGKDAYEALDHLLDRMLPARIAAVFDADALNLFARAPALLTRLTRLASGGAPVVLTPHPLE
AARLLDTDAPTVQRDRLAAAQALVNRCGAVVVLKGSGTVVAAPGVPPTVNPTGNGSLATGGTGDVLTGMIGALLAQGVPA
REAALAAVWLHGRAADDLVAAGEGPIGLHAGELCAPARRALNGLLKSDAYP
>Mature_530_residues
SAHPTWRDVLTDGILAERHGADLLFGSAAVRALETAAYRALAPFTLMARAGEAAADWLQARAPRGHLLLVAGPGNNGGDA
LVAATALHEAGRTVTVWLAADPARLPDDARRAWTEARAAHVPIEILHAPASVPATVTAIVDGLFGIGLARPLAGLHAALV
ETLNGSGLPAYALDIPSGLSGDTGQPPAPDSPVVRARATLTFLVAKPGLLTGAGRDATGDLALADLLAAQPAYDGVVEAD
ALVNAPARWLAHLPRRRHDGHKGTYGSVAVVGGAHGMVGAPLLSARGALHLGAGKVHVVSLADDAPRVDFAQPELMLHTW
GTLDLGGMQALAVGPGMGTGKDAYEALDHLLDRMLPARIAAVFDADALNLFARAPALLTRLTRLASGGAPVVLTPHPLEA
ARLLDTDAPTVQRDRLAAAQALVNRCGAVVVLKGSGTVVAAPGVPPTVNPTGNGSLATGGTGDVLTGMIGALLAQGVPAR
EAALAAVWLHGRAADDLVAAGEGPIGLHAGELCAPARRALNGLLKSDAYP

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=226, Percent_Identity=31.858407079646, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI1790609, Length=505, Percent_Identity=38.019801980198, Blast_Score=233, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17554656, Length=249, Percent_Identity=25.3012048192771, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17509719, Length=189, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322698, Length=277, Percent_Identity=24.9097472924188, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 53862; Mature: 53731

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00147 ARGINASE_1 ; PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHPTWRDVLTDGILAERHGADLLFGSAAVRALETAAYRALAPFTLMARAGEAAADWLQ
CCCCCCHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
ARAPRGHLLLVAGPGNNGGDALVAATALHEAGRTVTVWLAADPARLPDDARRAWTEARAA
HCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
HVPIEILHAPASVPATVTAIVDGLFGIGLARPLAGLHAALVETLNGSGLPAYALDIPSGL
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
SGDTGQPPAPDSPVVRARATLTFLVAKPGLLTGAGRDATGDLALADLLAAQPAYDGVVEA
CCCCCCCCCCCCCCEEHHEEEEEEEECCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCHH
DALVNAPARWLAHLPRRRHDGHKGTYGSVAVVGGAHGMVGAPLLSARGALHLGAGKVHVV
HHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCEEECCCCEEEE
SLADDAPRVDFAQPELMLHTWGTLDLGGMQALAVGPGMGTGKDAYEALDHLLDRMLPARI
EECCCCCCCCCCCCCEEEEECCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
AAVFDADALNLFARAPALLTRLTRLASGGAPVVLTPHPLEAARLLDTDAPTVQRDRLAAA
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHH
QALVNRCGAVVVLKGSGTVVAAPGVPPTVNPTGNGSLATGGTGDVLTGMIGALLAQGVPA
HHHHHHCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH
REAALAAVWLHGRAADDLVAAGEGPIGLHAGELCAPARRALNGLLKSDAYP
HHHHEEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAHPTWRDVLTDGILAERHGADLLFGSAAVRALETAAYRALAPFTLMARAGEAAADWLQ
CCCCCHHHHHHCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
ARAPRGHLLLVAGPGNNGGDALVAATALHEAGRTVTVWLAADPARLPDDARRAWTEARAA
HCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
HVPIEILHAPASVPATVTAIVDGLFGIGLARPLAGLHAALVETLNGSGLPAYALDIPSGL
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
SGDTGQPPAPDSPVVRARATLTFLVAKPGLLTGAGRDATGDLALADLLAAQPAYDGVVEA
CCCCCCCCCCCCCCEEHHEEEEEEEECCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCHH
DALVNAPARWLAHLPRRRHDGHKGTYGSVAVVGGAHGMVGAPLLSARGALHLGAGKVHVV
HHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCEEECCCCEEEE
SLADDAPRVDFAQPELMLHTWGTLDLGGMQALAVGPGMGTGKDAYEALDHLLDRMLPARI
EECCCCCCCCCCCCCEEEEECCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
AAVFDADALNLFARAPALLTRLTRLASGGAPVVLTPHPLEAARLLDTDAPTVQRDRLAAA
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHH
QALVNRCGAVVVLKGSGTVVAAPGVPPTVNPTGNGSLATGGTGDVLTGMIGALLAQGVPA
HHHHHHCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH
REAALAAVWLHGRAADDLVAAGEGPIGLHAGELCAPARRALNGLLKSDAYP
HHHHEEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]