| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is pgi [H]
Identifier: 17546438
GI number: 17546438
Start: 1837991
End: 1839610
Strand: Reverse
Name: pgi [H]
Synonym: RSc1719
Alternate gene names: 17546438
Gene position: 1839610-1837991 (Counterclockwise)
Preceding gene: 17546439
Following gene: 17546436
Centisome position: 49.5
GC content: 68.7
Gene sequence:
>1620_bases ATGCCCACCGCCCTTCCCGCCTGGCAGTCCCTGTCGCAACATGCCCAAGCGATCCGCGCCACCCACATGCGCGATTGGTT TGCCGCACCGGACGCCGAGCAACGGGTGCACGCCTTCACCGTGGAAGCCGCCGGGCTCACGCTCGACTACGCCAAGAACC GCATCACCCCCGAAACGCTCGCGCTGCTGCTCCAGCTCGCGGACGAAGCCGGCGTCCTCACGCTGCGCGATGCCATGCTG CGCGGTGAGCGCATCAACAACACCGAGCACCGTTCCGTCCTGCATGCCGCCCTGCGCGGCCACGCTGAAGATGACTACCG CGCCAACGGCGCCGCCGTGATGCCCGACGTGCTGCGCGTGCGCGCCCAGATGCGCGATTTCGCCCAGCGCGTGCACAGCG GCACCTGGACCGGCCATGCCGGCCAGCGCATCACCGACGTGGTCAACATCGGCATCGGCGGCTCCGACCTCGGCCCCCGC ATGGTGTGCCGCGCGCTGGCGCACCTCGCGGTGCCGCAGGTGCGCGTGCATTTCGTCTCCAACGTCGACGGCACTGACCT GGCCGAGACCCTCGCGGGCCTCAACCCCGACACCACGCTCGCCATCGTCTGCTCCAAGACCTTCACCACGCTGGAGACCA TGGCCAACGCGCACAGCATGCGCCGCTGGTTCATCGAGCACGGCGTGCCCGAGGCCCAGCTCAAGCAACACTTCGTCGCC GTCTCGACCAACCGCGACGCCGTGGTCGCATTCGGCATCGATCCGGACAACATGTTCACCTTCTGGGACTGGGTCGGCGG ACGCTTCTCGCTGTGGTCGGCCGTCGGCCTGTCGATCGTGCTGGCCATCGGGCCTGAGCAGTTCGAGACCATGCTCGACG GCGCCCGCGCGATGGACCGGCACTTCGCCTCCGCGGCACCGCGCGAGAACATGCCGCTGATCCTCGGCCTGCTGTCGGTC TGGTATCGCGGCTTCTTCGGCGCCGCCAGCGCCTGCACGGTGCCCTACTGCGCCCCGCTGGAGCTGCTCACCGACTTCAT GCAGCAGTTGGAGATGGAGAGTAACGGCAAGTCCGTCCAGCGCAACGGCGCGGCCATCGGCACTGACACCGGCCCCATCG TCTGGGGCACCGCCGGCACCAACGGCCAGCACGCCTATTTCCAGCTGATCCACCAGGGCTCGCAAATCGTGCCGGTGGAT TTCATCACCACGCTCGAACCGGTGCGCAGCCTGCCGGGCCACCACACCAAGCTGCTGGCCAACTGCTTTGCCCAGGGCGA AGCGCTGCTGCGCGGCCGCACGGCGGAAGAAGTGCGCGCAGACGGCATCACCGACGCGGCGCTGGTGCCGCACATGGTGT TCGAAGGCAACCGGCCGAGCAACACGATCCTGATGCAGCGGCTGGACGCCGCATCGCTCGGCGCCCTGATCGCCTGCGCC GAGCACCGCACCTTCGTGCAGGGCGCGGTCTGGAACATCAACTCGTTCGACCAATGGGGCGTCGAACTCGGCAAGAAGCT CGCCAAGCCGATCCTCGAAGAACTGGAAGGCGCGCCGGCCTCGGTGGCGCACGACGCCTCGACGGCGGCGCTGATCCGCC GCGCCAAGGCCGCGCGCTAA
Upstream 100 bases:
>100_bases CGCGCCCTCAACGGGCTGCTGAAATCAGACGCCTACCCATAGAGCACCCGCGCGGTGCGCCGTTATACTGCACATTCGTT TTCCCACGCCGACCCGCCGT
Downstream 100 bases:
>100_bases GGCGCCACAGGCTCAGAGTTCGGTAACGGTCTCATCGCCAACCAGGTGGCCGGCCTCGATGGTCAGGATGCGACTGCATC GCGCCGCGACCGAGCGGTCG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MPTALPAWQSLSQHAQAIRATHMRDWFAAPDAEQRVHAFTVEAAGLTLDYAKNRITPETLALLLQLADEAGVLTLRDAML RGERINNTEHRSVLHAALRGHAEDDYRANGAAVMPDVLRVRAQMRDFAQRVHSGTWTGHAGQRITDVVNIGIGGSDLGPR MVCRALAHLAVPQVRVHFVSNVDGTDLAETLAGLNPDTTLAIVCSKTFTTLETMANAHSMRRWFIEHGVPEAQLKQHFVA VSTNRDAVVAFGIDPDNMFTFWDWVGGRFSLWSAVGLSIVLAIGPEQFETMLDGARAMDRHFASAAPRENMPLILGLLSV WYRGFFGAASACTVPYCAPLELLTDFMQQLEMESNGKSVQRNGAAIGTDTGPIVWGTAGTNGQHAYFQLIHQGSQIVPVD FITTLEPVRSLPGHHTKLLANCFAQGEALLRGRTAEEVRADGITDAALVPHMVFEGNRPSNTILMQRLDAASLGALIACA EHRTFVQGAVWNINSFDQWGVELGKKLAKPILEELEGAPASVAHDASTAALIRRAKAAR
Sequences:
>Translated_539_residues MPTALPAWQSLSQHAQAIRATHMRDWFAAPDAEQRVHAFTVEAAGLTLDYAKNRITPETLALLLQLADEAGVLTLRDAML RGERINNTEHRSVLHAALRGHAEDDYRANGAAVMPDVLRVRAQMRDFAQRVHSGTWTGHAGQRITDVVNIGIGGSDLGPR MVCRALAHLAVPQVRVHFVSNVDGTDLAETLAGLNPDTTLAIVCSKTFTTLETMANAHSMRRWFIEHGVPEAQLKQHFVA VSTNRDAVVAFGIDPDNMFTFWDWVGGRFSLWSAVGLSIVLAIGPEQFETMLDGARAMDRHFASAAPRENMPLILGLLSV WYRGFFGAASACTVPYCAPLELLTDFMQQLEMESNGKSVQRNGAAIGTDTGPIVWGTAGTNGQHAYFQLIHQGSQIVPVD FITTLEPVRSLPGHHTKLLANCFAQGEALLRGRTAEEVRADGITDAALVPHMVFEGNRPSNTILMQRLDAASLGALIACA EHRTFVQGAVWNINSFDQWGVELGKKLAKPILEELEGAPASVAHDASTAALIRRAKAAR >Mature_538_residues PTALPAWQSLSQHAQAIRATHMRDWFAAPDAEQRVHAFTVEAAGLTLDYAKNRITPETLALLLQLADEAGVLTLRDAMLR GERINNTEHRSVLHAALRGHAEDDYRANGAAVMPDVLRVRAQMRDFAQRVHSGTWTGHAGQRITDVVNIGIGGSDLGPRM VCRALAHLAVPQVRVHFVSNVDGTDLAETLAGLNPDTTLAIVCSKTFTTLETMANAHSMRRWFIEHGVPEAQLKQHFVAV STNRDAVVAFGIDPDNMFTFWDWVGGRFSLWSAVGLSIVLAIGPEQFETMLDGARAMDRHFASAAPRENMPLILGLLSVW YRGFFGAASACTVPYCAPLELLTDFMQQLEMESNGKSVQRNGAAIGTDTGPIVWGTAGTNGQHAYFQLIHQGSQIVPVDF ITTLEPVRSLPGHHTKLLANCFAQGEALLRGRTAEEVRADGITDAALVPHMVFEGNRPSNTILMQRLDAASLGALIACAE HRTFVQGAVWNINSFDQWGVELGKKLAKPILEELEGAPASVAHDASTAALIRRAKAAR
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=551, Percent_Identity=47.5499092558984, Blast_Score=511, Evalue=1e-145, Organism=Homo sapiens, GI296080693, Length=551, Percent_Identity=43.9201451905626, Blast_Score=453, Evalue=1e-127, Organism=Escherichia coli, GI1790457, Length=545, Percent_Identity=50.2752293577982, Blast_Score=531, Evalue=1e-152, Organism=Caenorhabditis elegans, GI71996703, Length=514, Percent_Identity=49.2217898832685, Blast_Score=503, Evalue=1e-143, Organism=Caenorhabditis elegans, GI71996708, Length=514, Percent_Identity=49.2217898832685, Blast_Score=503, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6319673, Length=546, Percent_Identity=48.1684981684982, Blast_Score=515, Evalue=1e-147, Organism=Drosophila melanogaster, GI24651916, Length=544, Percent_Identity=48.7132352941176, Blast_Score=506, Evalue=1e-143, Organism=Drosophila melanogaster, GI24651914, Length=544, Percent_Identity=48.7132352941176, Blast_Score=506, Evalue=1e-143, Organism=Drosophila melanogaster, GI17737445, Length=544, Percent_Identity=48.7132352941176, Blast_Score=506, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 58631; Mature: 58500
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTALPAWQSLSQHAQAIRATHMRDWFAAPDAEQRVHAFTVEAAGLTLDYAKNRITPETL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEEEECCEEHHHHHCCCCHHHH ALLLQLADEAGVLTLRDAMLRGERINNTEHRSVLHAALRGHAEDDYRANGAAVMPDVLRV HHHHHHHHCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RAQMRDFAQRVHSGTWTGHAGQRITDVVNIGIGGSDLGPRMVCRALAHLAVPQVRVHFVS HHHHHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEC NVDGTDLAETLAGLNPDTTLAIVCSKTFTTLETMANAHSMRRWFIEHGVPEAQLKQHFVA CCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEE VSTNRDAVVAFGIDPDNMFTFWDWVGGRFSLWSAVGLSIVLAIGPEQFETMLDGARAMDR EECCCCEEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHH HFASAAPRENMPLILGLLSVWYRGFFGAASACTVPYCAPLELLTDFMQQLEMESNGKSVQ HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH RNGAAIGTDTGPIVWGTAGTNGQHAYFQLIHQGSQIVPVDFITTLEPVRSLPGHHTKLLA CCCCEECCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHH NCFAQGEALLRGRTAEEVRADGITDAALVPHMVFEGNRPSNTILMQRLDAASLGALIACA HHHHCCHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHH EHRTFVQGAVWNINSFDQWGVELGKKLAKPILEELEGAPASVAHDASTAALIRRAKAAR HHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCC >Mature Secondary Structure PTALPAWQSLSQHAQAIRATHMRDWFAAPDAEQRVHAFTVEAAGLTLDYAKNRITPETL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEEEECCEEHHHHHCCCCHHHH ALLLQLADEAGVLTLRDAMLRGERINNTEHRSVLHAALRGHAEDDYRANGAAVMPDVLRV HHHHHHHHCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RAQMRDFAQRVHSGTWTGHAGQRITDVVNIGIGGSDLGPRMVCRALAHLAVPQVRVHFVS HHHHHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEC NVDGTDLAETLAGLNPDTTLAIVCSKTFTTLETMANAHSMRRWFIEHGVPEAQLKQHFVA CCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEE VSTNRDAVVAFGIDPDNMFTFWDWVGGRFSLWSAVGLSIVLAIGPEQFETMLDGARAMDR EECCCCEEEEEECCCCCCEEHHHHCCCHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHH HFASAAPRENMPLILGLLSVWYRGFFGAASACTVPYCAPLELLTDFMQQLEMESNGKSVQ HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH RNGAAIGTDTGPIVWGTAGTNGQHAYFQLIHQGSQIVPVDFITTLEPVRSLPGHHTKLLA CCCCEECCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHH NCFAQGEALLRGRTAEEVRADGITDAALVPHMVFEGNRPSNTILMQRLDAASLGALIACA HHHHCCHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHH EHRTFVQGAVWNINSFDQWGVELGKKLAKPILEELEGAPASVAHDASTAALIRRAKAAR HHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA