| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546383
Identifier: 17546383
GI number: 17546383
Start: 1789543
End: 1789974
Strand: Reverse
Name: 17546383
Synonym: RSc1664
Alternate gene names: NA
Gene position: 1789974-1789543 (Counterclockwise)
Preceding gene: 17546384
Following gene: 17546382
Centisome position: 48.16
GC content: 65.51
Gene sequence:
>432_bases ATGCTGATTGGACTGACCGGCGCGGACGGCGTCGGCACGGTTACCGCTGCCGACCACCTCTGTCTGCACCACCGATTCAC GCAATTCCCACTCGCTGAACTGCGCGCCTGCTGGATGCTCGCCGACGATGCGGTCGACCCGACCAAGGCAGCCGCCAGCC TCAGCCAGCTTCTCGGCGACCTGGCGGACGTCGATGCCGTGGTCACCGGAGTCCGATTCGAGATCGAGGCCAGCATGATC CGCGAACGCGGCGGCGTGATCGTGCGCATTGAGCATCCCGGCGCGCCGCGCGTCATCGAGCATGCGAACGAAGCCGGTAT CAGGCTGCACGACGGCGATCGCGTGCTGCACAACTACGGCACGTTTTTCCACCTGTACGACCAGCTCGACACGCTGGTCA ACACCCTCCAATTCGAGCGGGCCGGCGCATGA
Upstream 100 bases:
>100_bases CGCCTACCTGAAAACCCAACGCGCCACACCGCGCGCCAGTTTTTCCACCATCGTTGACCTGAAAAAACTGCAGGCCAACG ACATCGACTGAGGCCACACC
Downstream 100 bases:
>100_bases CGATCACCACCGATCGCACTGCGCTGATCCTGCGCGTCGCCGAGCTCGAAGCGGAGGTGCGCATCTGGCGCGCCGCCGCC GTTGCCGAGGACGCATACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLIGLTGADGVGTVTAADHLCLHHRFTQFPLAELRACWMLADDAVDPTKAAASLSQLLGDLADVDAVVTGVRFEIEASMI RERGGVIVRIEHPGAPRVIEHANEAGIRLHDGDRVLHNYGTFFHLYDQLDTLVNTLQFERAGA
Sequences:
>Translated_143_residues MLIGLTGADGVGTVTAADHLCLHHRFTQFPLAELRACWMLADDAVDPTKAAASLSQLLGDLADVDAVVTGVRFEIEASMI RERGGVIVRIEHPGAPRVIEHANEAGIRLHDGDRVLHNYGTFFHLYDQLDTLVNTLQFERAGA >Mature_143_residues MLIGLTGADGVGTVTAADHLCLHHRFTQFPLAELRACWMLADDAVDPTKAAASLSQLLGDLADVDAVVTGVRFEIEASMI RERGGVIVRIEHPGAPRVIEHANEAGIRLHDGDRVLHNYGTFFHLYDQLDTLVNTLQFERAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15556; Mature: 15556
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGLTGADGVGTVTAADHLCLHHRFTQFPLAELRACWMLADDAVDPTKAAASLSQLLGD CEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LADVDAVVTGVRFEIEASMIRERGGVIVRIEHPGAPRVIEHANEAGIRLHDGDRVLHNYG HHHHHHHHHCCEEEHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCHHHHHH TFFHLYDQLDTLVNTLQFERAGA HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLIGLTGADGVGTVTAADHLCLHHRFTQFPLAELRACWMLADDAVDPTKAAASLSQLLGD CEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LADVDAVVTGVRFEIEASMIRERGGVIVRIEHPGAPRVIEHANEAGIRLHDGDRVLHNYG HHHHHHHHHCCEEEHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCHHHHHH TFFHLYDQLDTLVNTLQFERAGA HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA