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The map label for this gene is 17546377

Identifier: 17546377

GI number: 17546377

Start: 1785726

End: 1786511

Strand: Reverse

Name: 17546377

Synonym: RSc1658

Alternate gene names: NA

Gene position: 1786511-1785726 (Counterclockwise)

Preceding gene: 17546378

Following gene: 17546376

Centisome position: 48.07

GC content: 65.78

Gene sequence:

>786_bases
ATGCAAGCCATCATTTCGCAATTTCACGCCAGCTCCAAGCAGGGACTGGAAATCATCGCCGGCGCCTTGAGCGCCTTCGC
AACGGCAGCGACCGACAAGATCGCAAAGGCACTGCGCAACCCGATCGCCGCTGACCCGGCCGACGAACAATACGAGCTCG
ACGCCAAACTGTGGGACAGCGCGCCGACGGTGGCGGTACCGAAATTCGCAGAGTTCAAGCAACTCGAGGACGTCGGCCAC
CGATTCCTGGCCACCGCCGAAGGCCTATTCGTCGAGGTGCGCCGGCCGTGGCTGCACGTCATCCAGCCCGTGGCCCCACT
CAACGGCCAAACCGTGCGCCCGCCGTATGGCACCGTCAAACAGAAGGTCGACCTGGCATTCGAGCGCCTGGGCGCCACCT
TCCCGATGGTGCGTGCGTTCATCGAGGCCGCCCGCAAGGCCGCGCCCAACGAGCACGCGGCCTGGGTCGTCTGGGACAGC
CGCACGGGCGACCTGGCCTATCGCGAACTCCAGATCACGGACGCAAGCCCGGGCGCCATCAGCTACGACCGGCCGCGGCT
GGAGGATCACGAATCGCTGGTTGTCGACATGCACAGCCACGGCGCGCTTGCGGCATTCTTCAGCGAGCAGGACAACCGCG
ACGACGCTGGCGAGGTCAAAATCTCCTGCGTCGTCGGCGACCTGGCCGACGGCAAGACGCCGAGCATTCAATTCCGCCTG
TGCGTGCTGGGCATGTTCCTACCGCTCAAGGTGCCGGCTGACGCCGTGCTGGGGGCTGCAGCGTGA

Upstream 100 bases:

>100_bases
CTCGACCACCCCGAAATCACGGAATTTCCCGCAACCGCCCTGCTGCCGCGCAAAGAAGCGCTGACGCAGGCGATCACCCG
CATCACCGCCGGAGACTGAC

Downstream 100 bases:

>100_bases
GCGAGGCCGTGCACATCACCCCGCCGCGCATGCTGTCCGCGCAGGTGCGCGTGGTGCTGGTCGGTTGCGGCGGCAACGGC
TCGCAAATGCTGACCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MQAIISQFHASSKQGLEIIAGALSAFATAATDKIAKALRNPIAADPADEQYELDAKLWDSAPTVAVPKFAEFKQLEDVGH
RFLATAEGLFVEVRRPWLHVIQPVAPLNGQTVRPPYGTVKQKVDLAFERLGATFPMVRAFIEAARKAAPNEHAAWVVWDS
RTGDLAYRELQITDASPGAISYDRPRLEDHESLVVDMHSHGALAAFFSEQDNRDDAGEVKISCVVGDLADGKTPSIQFRL
CVLGMFLPLKVPADAVLGAAA

Sequences:

>Translated_261_residues
MQAIISQFHASSKQGLEIIAGALSAFATAATDKIAKALRNPIAADPADEQYELDAKLWDSAPTVAVPKFAEFKQLEDVGH
RFLATAEGLFVEVRRPWLHVIQPVAPLNGQTVRPPYGTVKQKVDLAFERLGATFPMVRAFIEAARKAAPNEHAAWVVWDS
RTGDLAYRELQITDASPGAISYDRPRLEDHESLVVDMHSHGALAAFFSEQDNRDDAGEVKISCVVGDLADGKTPSIQFRL
CVLGMFLPLKVPADAVLGAAA
>Mature_261_residues
MQAIISQFHASSKQGLEIIAGALSAFATAATDKIAKALRNPIAADPADEQYELDAKLWDSAPTVAVPKFAEFKQLEDVGH
RFLATAEGLFVEVRRPWLHVIQPVAPLNGQTVRPPYGTVKQKVDLAFERLGATFPMVRAFIEAARKAAPNEHAAWVVWDS
RTGDLAYRELQITDASPGAISYDRPRLEDHESLVVDMHSHGALAAFFSEQDNRDDAGEVKISCVVGDLADGKTPSIQFRL
CVLGMFLPLKVPADAVLGAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28314; Mature: 28314

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIISQFHASSKQGLEIIAGALSAFATAATDKIAKALRNPIAADPADEQYELDAKLWDS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHCCC
APTVAVPKFAEFKQLEDVGHRFLATAEGLFVEVRRPWLHVIQPVAPLNGQTVRPPYGTVK
CCCEECCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCEECCCCHHHH
QKVDLAFERLGATFPMVRAFIEAARKAAPNEHAAWVVWDSRTGDLAYRELQITDASPGAI
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCC
SYDRPRLEDHESLVVDMHSHGALAAFFSEQDNRDDAGEVKISCVVGDLADGKTPSIQFRL
CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHH
CVLGMFLPLKVPADAVLGAAA
HHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure
MQAIISQFHASSKQGLEIIAGALSAFATAATDKIAKALRNPIAADPADEQYELDAKLWDS
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHCCC
APTVAVPKFAEFKQLEDVGHRFLATAEGLFVEVRRPWLHVIQPVAPLNGQTVRPPYGTVK
CCCEECCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCCEECCCCHHHH
QKVDLAFERLGATFPMVRAFIEAARKAAPNEHAAWVVWDSRTGDLAYRELQITDASPGAI
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCC
SYDRPRLEDHESLVVDMHSHGALAAFFSEQDNRDDAGEVKISCVVGDLADGKTPSIQFRL
CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEHH
CVLGMFLPLKVPADAVLGAAA
HHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA