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The map label for this gene is 17546279

Identifier: 17546279

GI number: 17546279

Start: 1675859

End: 1676176

Strand: Reverse

Name: 17546279

Synonym: RSc1560

Alternate gene names: NA

Gene position: 1676176-1675859 (Counterclockwise)

Preceding gene: 17546280

Following gene: 17546277

Centisome position: 45.1

GC content: 65.41

Gene sequence:

>318_bases
ATGGCCACCACCGACGCGCACCGCTTCGGCAGCTTCGCCGAGTTCTATCCGTACTACCTCGGCGAGCACCGCAACCGCAC
CTGCCGGCGCCTGCATTTCGCGGGATCGACGCTCGCGCTGGTGTGCCTGATCCAGCTGGTGTTCACGGGCAGTCTGTGGT
GGCTGCTGGCCGCCGCCGTCAGCGGCTACGCCTTTGCCTGGGTCGGTCACTTCGCCTTCGAGAAGAACCGCCCCGCCACC
TTCCGCCACCCGATCTACAGCCTCATGGGCGACTGGGTGATGTACCGCGACATCTGGATCGGCAAGATTCCGTTCTGA

Upstream 100 bases:

>100_bases
ATGGGAGAATGTCCGGACGGCACGCTCGATGCGCTGATCGCCTTTGCGCGCGAGCGCGCCGCCGTCGCCGCGTAACCGGC
GTCCCGCACAGGAGGCGACC

Downstream 100 bases:

>100_bases
CCGGCTTCCGGACGCGGCTCAGGCGCGGGCGGACGCCGCCAGCGTTGCGGCGGCCGGCGCGGCCGCGGCTTCGGCAGCGG
CCTTCACCACGCCGGGCTCA

Product: transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MATTDAHRFGSFAEFYPYYLGEHRNRTCRRLHFAGSTLALVCLIQLVFTGSLWWLLAAAVSGYAFAWVGHFAFEKNRPAT
FRHPIYSLMGDWVMYRDIWIGKIPF

Sequences:

>Translated_105_residues
MATTDAHRFGSFAEFYPYYLGEHRNRTCRRLHFAGSTLALVCLIQLVFTGSLWWLLAAAVSGYAFAWVGHFAFEKNRPAT
FRHPIYSLMGDWVMYRDIWIGKIPF
>Mature_104_residues
ATTDAHRFGSFAEFYPYYLGEHRNRTCRRLHFAGSTLALVCLIQLVFTGSLWWLLAAAVSGYAFAWVGHFAFEKNRPATF
RHPIYSLMGDWVMYRDIWIGKIPF

Specific function: Unknown

COG id: COG4323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12213; Mature: 12082

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTDAHRFGSFAEFYPYYLGEHRNRTCRRLHFAGSTLALVCLIQLVFTGSLWWLLAAAV
CCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGYAFAWVGHFAFEKNRPATFRHPIYSLMGDWVMYRDIWIGKIPF
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATTDAHRFGSFAEFYPYYLGEHRNRTCRRLHFAGSTLALVCLIQLVFTGSLWWLLAAAV
CCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGYAFAWVGHFAFEKNRPATFRHPIYSLMGDWVMYRDIWIGKIPF
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA