| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546229
Identifier: 17546229
GI number: 17546229
Start: 1613570
End: 1613788
Strand: Direct
Name: 17546229
Synonym: RSc1510
Alternate gene names: NA
Gene position: 1613570-1613788 (Clockwise)
Preceding gene: 17546228
Following gene: 17546230
Centisome position: 43.42
GC content: 67.58
Gene sequence:
>219_bases GTGTGCGTGATGGCGGCGCGCGGCGCCTTCAATGCGATCGAGGAAATCGCGGGGCTGACGTCGACCCTGCTCGCGCCGGT GCTTGCGCTGCTGCAGCGTGACGTTGCGAGCGGGTTGTCGCAAGATGAGATCAGCGGATTCATTCATCAGGTCAGGGTGA CGGCGTCCCGGGATGCTTCGCGTCGGCGGGCCGCGTGGCTGTCGCCGTCGGAGGCGTGA
Upstream 100 bases:
>100_bases AACAGGTGATCGTGATCGCACCCGTGTGGGCGGGGCGGCTGGCTTCGCCGATGCGCATCTTCCTGGCCGATCGACTGCCG TTTCCGGTGAGGCTTCCGCG
Downstream 100 bases:
>100_bases CCCGCCGGCGGCCGGCCTGACGGCACAATCGACGAGCAAGGAGAGTGGCCATGGCCCAGTTGACCGAAGCACAGCAGCAT CAACTGATCGCGCTGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDASRRRAAWLSPSEA
Sequences:
>Translated_72_residues MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDASRRRAAWLSPSEA >Mature_72_residues MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDASRRRAAWLSPSEA
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7655; Mature: 7655
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDAS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHH RRRAAWLSPSEA HHHHHCCCCCCC >Mature Secondary Structure MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDAS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHH RRRAAWLSPSEA HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA