| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546202
Identifier: 17546202
GI number: 17546202
Start: 1588801
End: 1589148
Strand: Reverse
Name: 17546202
Synonym: RSc1483
Alternate gene names: NA
Gene position: 1589148-1588801 (Counterclockwise)
Preceding gene: 17546203
Following gene: 17546201
Centisome position: 42.76
GC content: 66.95
Gene sequence:
>348_bases ATGGGCGAAGCCAAGCGGCGCGGCACGCAGGCGCAGCGCGTTTCCCAGGCACAGGCGCGGCTGGATGCGCTGCGCCCGGA AAAACTGGTCTGCGGCGCCTGCCAGACCGCCTTTACCACCTTCGACGGCATGGAGCCGCGCAATCTGCCCGGCATCCGCG CCATCTTCGGCGGCGAATGCCCGAACTGCGGCGAAAGCGTGATCAGCTTCAGCGGCGAGCCCGAGGCCGTCGCCAACGCG ATGCTGCTTTATCAGCAGACCATGGAAAACGCCAAGCTCGGCGCTCAGACGCAGGAAGGCGAGCACACGCCCTACGTCGA TACCGACGACGGCAAGCCGCAGTCCTGA
Upstream 100 bases:
>100_bases GGCGGCAACGAACCCGCGATCATCGTTTTTCGGACCGCATTCGAGTCGGCTTCGGTATCATCGCGCCTTCCACTACCCCC AAGAACACAGGAAGGACATC
Downstream 100 bases:
>100_bases GGCCGCCATGCAGAACACGCCGGCACGCCGCTACCGCCACTACAAGGGCGGCGAATACGAATGGCTGTGCGAGGCCACGT ACGAGCCCGATCCCACGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGEAKRRGTQAQRVSQAQARLDALRPEKLVCGACQTAFTTFDGMEPRNLPGIRAIFGGECPNCGESVISFSGEPEAVANA MLLYQQTMENAKLGAQTQEGEHTPYVDTDDGKPQS
Sequences:
>Translated_115_residues MGEAKRRGTQAQRVSQAQARLDALRPEKLVCGACQTAFTTFDGMEPRNLPGIRAIFGGECPNCGESVISFSGEPEAVANA MLLYQQTMENAKLGAQTQEGEHTPYVDTDDGKPQS >Mature_114_residues GEAKRRGTQAQRVSQAQARLDALRPEKLVCGACQTAFTTFDGMEPRNLPGIRAIFGGECPNCGESVISFSGEPEAVANAM LLYQQTMENAKLGAQTQEGEHTPYVDTDDGKPQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12378; Mature: 12247
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEAKRRGTQAQRVSQAQARLDALRPEKLVCGACQTAFTTFDGMEPRNLPGIRAIFGGEC CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC PNCGESVISFSGEPEAVANAMLLYQQTMENAKLGAQTQEGEHTPYVDTDDGKPQS CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure GEAKRRGTQAQRVSQAQARLDALRPEKLVCGACQTAFTTFDGMEPRNLPGIRAIFGGEC CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC PNCGESVISFSGEPEAVANAMLLYQQTMENAKLGAQTQEGEHTPYVDTDDGKPQS CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA