| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546185
Identifier: 17546185
GI number: 17546185
Start: 1568971
End: 1569876
Strand: Reverse
Name: 17546185
Synonym: RSc1466
Alternate gene names: NA
Gene position: 1569876-1568971 (Counterclockwise)
Preceding gene: 17546186
Following gene: 17546184
Centisome position: 42.24
GC content: 70.09
Gene sequence:
>906_bases ATGCCGGTCGACTCGATAGACGACTGCATCGCCCGACTGCAAACCCAGGGCTACTTCGCCAGCCGCGAGCTGGCGACCGC CCTGTTTCTCGCGCTGCGCATGCAGCGGCCGCTGTTCCTGGAAGGCGAACCGGGCGTCGGCAAGACTGAACTGGCGAAGG CCGCGGCCGGGCTGCTCGGCACGTCGCTGCTGCGGCTGCAGTGCTATGAGGGGCTCGATACCGCCAGCGCGCTCTACGAA TGGGACTACCCGCGCCAGATCATGGCGCTGCGCCTGGCCGAGGCGGCCGGCGAGCGGCCCCGCGCCGACACCCTCTACCG CGACGAATTCCTGCTCAAGCGCCCGCTGCTGCAGGCCCTGCTGCCCGACCCTGCGCACCCCACGGATACCGATCGGCCGC GCGTGCTGCTGATCGACGAGATCGACCGCGCCGACGAGCCGTTCGAGGCCTTCCTGCTGGAGCTGCTGTCGGATTTCCAG GTGTCGATTCCCGAATTCGGCACCGTGCGCGCGCAGACGATCCCGCTGGTCGTCATGACCTCCAACCGCACGCGCGAAGT GCACGATGCGCTCAAGCGGCGCTGCCTGTACCAGTGGATCGGCTACCCGGACCCGGCGCGCGAGCTGCAGATCGTGGCCC AGCGCGCCCCCGAGGCCGCCGCCCGGCTGCAGCAGCGCGCGGTGGCGTTCGTGCACCGGCTGCGCGGCATCGACCTGTTC AAGGCGCCGGGCATTGCCGAGGCCATCGACTGGTGCCGCGCGCTGGCGGCGCTGAACGTCACCGAGCTCGACCCGCAGTC GGTGCAGGACACGCTGGGCGTGCTGCTGAAGTACCAGGACGACCTGGCCCGCGTGGACACGCCGACCATCGAGCAGTTAC TGACCGCCCCGGCCCTGCCAGAATGA
Upstream 100 bases:
>100_bases GCGACCTGCACGCCTCGCCGGAATACCGCGCGCACCTGATCCCGGTGCTGGCGGCCCGCGCCGTCGAGCAGGCCCTCGCA CGGCACCACTAGGGAGACGC
Downstream 100 bases:
>100_bases CGCCATGCCGGCCCCGACGCCCTGCTCCCCACCAATGCTGGCCCGCAACGTGACGCATTTCGTGCGGCTGCTGCGCGGCG CCGGCATGCCGCTGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; ATPase AAA Family Protein; ATPase Central Domain-Containing Protein; AAA ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPVDSIDDCIARLQTQGYFASRELATALFLALRMQRPLFLEGEPGVGKTELAKAAAGLLGTSLLRLQCYEGLDTASALYE WDYPRQIMALRLAEAAGERPRADTLYRDEFLLKRPLLQALLPDPAHPTDTDRPRVLLIDEIDRADEPFEAFLLELLSDFQ VSIPEFGTVRAQTIPLVVMTSNRTREVHDALKRRCLYQWIGYPDPARELQIVAQRAPEAAARLQQRAVAFVHRLRGIDLF KAPGIAEAIDWCRALAALNVTELDPQSVQDTLGVLLKYQDDLARVDTPTIEQLLTAPALPE
Sequences:
>Translated_301_residues MPVDSIDDCIARLQTQGYFASRELATALFLALRMQRPLFLEGEPGVGKTELAKAAAGLLGTSLLRLQCYEGLDTASALYE WDYPRQIMALRLAEAAGERPRADTLYRDEFLLKRPLLQALLPDPAHPTDTDRPRVLLIDEIDRADEPFEAFLLELLSDFQ VSIPEFGTVRAQTIPLVVMTSNRTREVHDALKRRCLYQWIGYPDPARELQIVAQRAPEAAARLQQRAVAFVHRLRGIDLF KAPGIAEAIDWCRALAALNVTELDPQSVQDTLGVLLKYQDDLARVDTPTIEQLLTAPALPE >Mature_300_residues PVDSIDDCIARLQTQGYFASRELATALFLALRMQRPLFLEGEPGVGKTELAKAAAGLLGTSLLRLQCYEGLDTASALYEW DYPRQIMALRLAEAAGERPRADTLYRDEFLLKRPLLQALLPDPAHPTDTDRPRVLLIDEIDRADEPFEAFLLELLSDFQV SIPEFGTVRAQTIPLVVMTSNRTREVHDALKRRCLYQWIGYPDPARELQIVAQRAPEAAARLQQRAVAFVHRLRGIDLFK APGIAEAIDWCRALAALNVTELDPQSVQDTLGVLLKYQDDLARVDTPTIEQLLTAPALPE
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33699; Mature: 33568
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDSIDDCIARLQTQGYFASRELATALFLALRMQRPLFLEGEPGVGKTELAKAAAGLLG CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH TSLLRLQCYEGLDTASALYEWDYPRQIMALRLAEAAGERPRADTLYRDEFLLKRPLLQAL HHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LPDPAHPTDTDRPRVLLIDEIDRADEPFEAFLLELLSDFQVSIPEFGTVRAQTIPLVVMT CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE SNRTREVHDALKRRCLYQWIGYPDPARELQIVAQRAPEAAARLQQRAVAFVHRLRGIDLF CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHH KAPGIAEAIDWCRALAALNVTELDPQSVQDTLGVLLKYQDDLARVDTPTIEQLLTAPALP CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC E C >Mature Secondary Structure PVDSIDDCIARLQTQGYFASRELATALFLALRMQRPLFLEGEPGVGKTELAKAAAGLLG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH TSLLRLQCYEGLDTASALYEWDYPRQIMALRLAEAAGERPRADTLYRDEFLLKRPLLQAL HHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LPDPAHPTDTDRPRVLLIDEIDRADEPFEAFLLELLSDFQVSIPEFGTVRAQTIPLVVMT CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE SNRTREVHDALKRRCLYQWIGYPDPARELQIVAQRAPEAAARLQQRAVAFVHRLRGIDLF CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHH KAPGIAEAIDWCRALAALNVTELDPQSVQDTLGVLLKYQDDLARVDTPTIEQLLTAPALP CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA