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The map label for this gene is tse [H]

Identifier: 17546179

GI number: 17546179

Start: 1562194

End: 1563735

Strand: Direct

Name: tse [H]

Synonym: RSc1460

Alternate gene names: 17546179

Gene position: 1562194-1563735 (Clockwise)

Preceding gene: 17546178

Following gene: 17546192

Centisome position: 42.03

GC content: 69.39

Gene sequence:

>1542_bases
ATGCTCGCTCGCCTGACGATACGCACCCGACTGGTCCTCACGGTTTCCATTCTGTTCCTGCTGGCCTTGCTGATCGGCGT
GGCCGGGCTGCTTGGCCTGCGCGACGCGAACGGCGCGCACGAAGAGACCTACCGCAACCAGTTCCCGTCGGCGCTCGCGC
TGGGCGAATCCGACCTCAGCCTGACCCGCGCCCGCACGGCGCTCGACAAGGCGATGCTGTATCCGGAAGACAAGGACGCG
ATGCAGTTGCTGGACCGCACCGAAGAGCTGATCACCGGCTCCGACGCGGCCTGGAAGAAATACCTGGCGCTGCCGCACGG
CGACGAAGAAACGCGGCTGTCCAAGGAGGTCGGCACCAAGCGCGAAGCGGCGGCCGGCAGCCTGCGCGACATCATCAAGG
CGCTGCGCGCGAGCGACCGGGCCGCGGCCGACGCCATCATGGACAAGCGCGTTTCCAAGTCCTTCCGCGAGGCGAACGAC
GCCAGCCAGGCGCTCGGCAAGCAGCAGTTGACGTTCTCCAAGGCCAATTTCGACGATTCCCAGCAGGCCTACGCGCGCAT
CCGCAATCTGGTGATCGCGGCCATCGTGCTCGCGCTGGTGGTGTCGGCCGGATGCGCGTGGCTGCTGCTGCGCGCCATCG
TCGGGCCGCTGAATGCCACGCTGGCACAGTTCGACCGCATTGCCGCCGGCGACCTGACGCAGCCCGTGCGCATCGACCGC
CGCGATGAGATGGGCCACCTGCTGGAGGGCCTCGCCCGCATGCAGGCCGCGCTGACGGACACGGTGCGCCGGGTGCGCCA
TGGCTCGGAATCGATCGGCGCGGCCACCAAGCAGATCGCCGCCGGCAACGCCGACCTGTCGCAGCGCACCGAAGGGCAGG
CGAGCTCGCTGGAAGAGACGGCGTCGAGCATGGAGGAGATGACCTCGATCGTGCGCCAGAACGCCGACAACGCCCGCCAG
GCCAGCCAGCTGGCCGACAGCGCCTCGGCGGTCGCCAGCCAGGGCGGCGCCGTGGTGACCGACGTGGTGGCGACCATGCG
CGAGATCAGCGCGTCGTCGCGCACGGTGTCGGAGATCATCGGCGTGATCGACGGCATTGCGTTCCAGACCAACATCCTGG
CGCTCAACGCCGCGGTGGAGGCCGCCCGCGCCGGCGAGCAGGGCCGCGGCTTCGCGGTCGTGGCCGGCGAGGTGCGCAGC
CTGGCGCAGCGCAGCGCCGCGGCCGCCAAAGAGATCAAGGAGATGATCGAAGCCTCGCTCGCCAAGGTCGACACCGGCAG
CAAGCTGGCCGAGCAGGCCGGCAGCACCATGGAAAACATCGTCACCTCCATCCGCCGCGTGACGGACATCATGGGCGAGA
TCGCCGCGGCCTCCAGCGAGCAGAGCTCGGGCATCGAGCAGGTCAACAAGGCCGTCACGCTGATGGACGAAGCCACCCAG
CAGAACGCCGCGCTGGTCGAGCAGGCCGCCGCCGCGGCCGAATCGCTGGAAGAGCAGGCGCAGGCGCTGAACGAGGCGAT
CGCGGCCTTCCGGCTGGCCTGA

Upstream 100 bases:

>100_bases
TTTGAGAACGGGCTACCGATAGACCCCATTGCAGCCGGCCGGCCGCCGCGATGGTCGTGGCGCGTGAGAGAGCCGGCGTA
GTCCTCCGTTCTCTCACGCT

Downstream 100 bases:

>100_bases
CGCGCGCCGGGCCCGGCTGGCCGCGCGGGCTTACTCGGTGGTGCTGGGGTTCCAGTACGCCTGCGCGATATGCGGCTGCG
CGGCCAGCGCGCCGACGATC

Product: methyl-accepting chemotaxis transducer transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MLARLTIRTRLVLTVSILFLLALLIGVAGLLGLRDANGAHEETYRNQFPSALALGESDLSLTRARTALDKAMLYPEDKDA
MQLLDRTEELITGSDAAWKKYLALPHGDEETRLSKEVGTKREAAAGSLRDIIKALRASDRAAADAIMDKRVSKSFREAND
ASQALGKQQLTFSKANFDDSQQAYARIRNLVIAAIVLALVVSAGCAWLLLRAIVGPLNATLAQFDRIAAGDLTQPVRIDR
RDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLSQRTEGQASSLEETASSMEEMTSIVRQNADNARQ
ASQLADSASAVASQGGAVVTDVVATMREISASSRTVSEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRS
LAQRSAAAAKEIKEMIEASLAKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQVNKAVTLMDEATQ
QNAALVEQAAAAAESLEEQAQALNEAIAAFRLA

Sequences:

>Translated_513_residues
MLARLTIRTRLVLTVSILFLLALLIGVAGLLGLRDANGAHEETYRNQFPSALALGESDLSLTRARTALDKAMLYPEDKDA
MQLLDRTEELITGSDAAWKKYLALPHGDEETRLSKEVGTKREAAAGSLRDIIKALRASDRAAADAIMDKRVSKSFREAND
ASQALGKQQLTFSKANFDDSQQAYARIRNLVIAAIVLALVVSAGCAWLLLRAIVGPLNATLAQFDRIAAGDLTQPVRIDR
RDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLSQRTEGQASSLEETASSMEEMTSIVRQNADNARQ
ASQLADSASAVASQGGAVVTDVVATMREISASSRTVSEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRS
LAQRSAAAAKEIKEMIEASLAKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQVNKAVTLMDEATQ
QNAALVEQAAAAAESLEEQAQALNEAIAAFRLA
>Mature_513_residues
MLARLTIRTRLVLTVSILFLLALLIGVAGLLGLRDANGAHEETYRNQFPSALALGESDLSLTRARTALDKAMLYPEDKDA
MQLLDRTEELITGSDAAWKKYLALPHGDEETRLSKEVGTKREAAAGSLRDIIKALRASDRAAADAIMDKRVSKSFREAND
ASQALGKQQLTFSKANFDDSQQAYARIRNLVIAAIVLALVVSAGCAWLLLRAIVGPLNATLAQFDRIAAGDLTQPVRIDR
RDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLSQRTEGQASSLEETASSMEEMTSIVRQNADNARQ
ASQLADSASAVASQGGAVVTDVVATMREISASSRTVSEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRS
LAQRSAAAAKEIKEMIEASLAKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQVNKAVTLMDEATQ
QNAALVEQAAAAAESLEEQAQALNEAIAAFRLA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=532, Percent_Identity=44.5488721804511, Blast_Score=348, Evalue=4e-97,
Organism=Escherichia coli, GI1788195, Length=526, Percent_Identity=46.3878326996198, Blast_Score=348, Evalue=4e-97,
Organism=Escherichia coli, GI1788194, Length=538, Percent_Identity=44.2379182156134, Blast_Score=339, Evalue=3e-94,
Organism=Escherichia coli, GI1787690, Length=323, Percent_Identity=56.3467492260062, Blast_Score=314, Evalue=7e-87,
Organism=Escherichia coli, GI1789453, Length=331, Percent_Identity=38.368580060423, Blast_Score=206, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 54355; Mature: 54355

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARLTIRTRLVLTVSILFLLALLIGVAGLLGLRDANGAHEETYRNQFPSALALGESDLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCCHHH
LTRARTALDKAMLYPEDKDAMQLLDRTEELITGSDAAWKKYLALPHGDEETRLSKEVGTK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCH
REAAAGSLRDIIKALRASDRAAADAIMDKRVSKSFREANDASQALGKQQLTFSKANFDDS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCH
QQAYARIRNLVIAAIVLALVVSAGCAWLLLRAIVGPLNATLAQFDRIAAGDLTQPVRIDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLSQRTEGQASSLEET
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH
ASSMEEMTSIVRQNADNARQASQLADSASAVASQGGAVVTDVVATMREISASSRTVSEII
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKEMIEASL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQVNKAVTLMDEATQ
HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH
QNAALVEQAAAAAESLEEQAQALNEAIAAFRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLARLTIRTRLVLTVSILFLLALLIGVAGLLGLRDANGAHEETYRNQFPSALALGESDLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHCCCCHHH
LTRARTALDKAMLYPEDKDAMQLLDRTEELITGSDAAWKKYLALPHGDEETRLSKEVGTK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCH
REAAAGSLRDIIKALRASDRAAADAIMDKRVSKSFREANDASQALGKQQLTFSKANFDDS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCH
QQAYARIRNLVIAAIVLALVVSAGCAWLLLRAIVGPLNATLAQFDRIAAGDLTQPVRIDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RDEMGHLLEGLARMQAALTDTVRRVRHGSESIGAATKQIAAGNADLSQRTEGQASSLEET
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH
ASSMEEMTSIVRQNADNARQASQLADSASAVASQGGAVVTDVVATMREISASSRTVSEII
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKEMIEASL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AKVDTGSKLAEQAGSTMENIVTSIRRVTDIMGEIAAASSEQSSGIEQVNKAVTLMDEATQ
HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH
QNAALVEQAAAAAESLEEQAQALNEAIAAFRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]