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The map label for this gene is ygcF [C]

Identifier: 17546168

GI number: 17546168

Start: 1551351

End: 1551989

Strand: Direct

Name: ygcF [C]

Synonym: RSc1449

Alternate gene names: 17546168

Gene position: 1551351-1551989 (Clockwise)

Preceding gene: 17546162

Following gene: 17546169

Centisome position: 41.74

GC content: 68.86

Gene sequence:

>639_bases
ATGACTTACGCCGTCAAGGAAATCTTCTACACGCTGCAGGGCGAGGGTGCCAACACCGGCCGCGCAGCCGTGTTCTGCCG
CTTCGCGGGCTGCAACCTGTGGAGCGGCCGCGAGGCCGACCGCGCCGCCGCCATCTGCCAGTTCTGTGACACCGATTTCG
TCGGCACGGACGGCACGCTGGGCGGCAAATATCCCACCGCCGATGCACTTGCCGACACCGTCGCCGCCCAATGGCCGGCC
GCGGCCACGGGCGGGCGGCCGCTGGTGGTCTGCACCGGCGGCGAGCCGCTGCTGCAGCTCGACCGGCCCCTGATCGACGC
GCTGCACGCGCGCGGCTTCGAGATCGCCATCGAGACCAACGGCACCCTCGCCGTGCCGGACGGCATCGACTGGGTTTGCG
TGAGCCCGAAAATGGGCGCCGAACTGGTCGTCACCCGCGGCGACGAGCTCAAGGTGGTGATCCCGCAGCCGGGCCAGGAC
CTCGACGCCTACGAACGGCTGGATTTCCGGCATTTCTTCCTGCAGCCCATGGATGGGCCGCTGGCGCGCCGGAATACAGC
GCTGGCCGTCGAGCTGTGCCAGCGTCGTCCGCGCTGGCATCTGTCGCTGCAAACCCATAAGATGCTGGGCATCCGCTGA

Upstream 100 bases:

>100_bases
CCTTCTGCGGGGTGTCCCGATTTGTGAAACAATACCGGGTTGATCACTGGTACGGTTTGCGCGGGAATCCGTAGTTTCCT
GTGAATGCCACCGTTCAGAC

Downstream 100 bases:

>100_bases
AGGCGGCTGCATCCCAGTCCCGTCCGATCCAGCCGTTGCGCGGCCCGCGCTGCCGCCACCTCGCTCCATGACCAAGACCG
TTTCCATCACGCGCCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Organic Radical Activating Protein; Radical SAM Domain Protein; Radical Activating; Organic Radical Activating; Organic Radical Activating-Like Protein; Radical Sam Domain Protein; Queuosine Biosynthesis Protein QueE; NrdG Protein; Radical SAM; Organic Radical Activating Protein; Radical SAM Superfamily Protein; QueC Protein; 6- Pyruvoyltetrahydropterin 2-Reductase; Queuosine Biosynthesis QueE Radical SAM; Anaerobic Ribonucleotide Reductase Activating Protein NrdG; GntS Family Protein; Radical SAM Family Protein; Organic Radical Activating Protein NrdG; Radical SAM Superfamily

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCDTDFVGTDGTLGGKYPTADALADTVAAQWPA
AATGGRPLVVCTGGEPLLQLDRPLIDALHARGFEIAIETNGTLAVPDGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQD
LDAYERLDFRHFFLQPMDGPLARRNTALAVELCQRRPRWHLSLQTHKMLGIR

Sequences:

>Translated_212_residues
MTYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCDTDFVGTDGTLGGKYPTADALADTVAAQWPA
AATGGRPLVVCTGGEPLLQLDRPLIDALHARGFEIAIETNGTLAVPDGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQD
LDAYERLDFRHFFLQPMDGPLARRNTALAVELCQRRPRWHLSLQTHKMLGIR
>Mature_211_residues
TYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCDTDFVGTDGTLGGKYPTADALADTVAAQWPAA
ATGGRPLVVCTGGEPLLQLDRPLIDALHARGFEIAIETNGTLAVPDGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQDL
DAYERLDFRHFFLQPMDGPLARRNTALAVELCQRRPRWHLSLQTHKMLGIR

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23075; Mature: 22943

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCDTDFVGTDGTL
CCEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
GGKYPTADALADTVAAQWPAAATGGRPLVVCTGGEPLLQLDRPLIDALHARGFEIAIETN
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECC
GTLAVPDGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQDLDAYERLDFRHFFLQPMDGP
CEEECCCCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHCHHEEEECCCCCC
LARRNTALAVELCQRRPRWHLSLQTHKMLGIR
CHHCCHHHHHHHHHCCCCEEEEEEECEEECCC
>Mature Secondary Structure 
TYAVKEIFYTLQGEGANTGRAAVFCRFAGCNLWSGREADRAAAICQFCDTDFVGTDGTL
CEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
GGKYPTADALADTVAAQWPAAATGGRPLVVCTGGEPLLQLDRPLIDALHARGFEIAIETN
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECC
GTLAVPDGIDWVCVSPKMGAELVVTRGDELKVVIPQPGQDLDAYERLDFRHFFLQPMDGP
CEEECCCCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHCHHEEEECCCCCC
LARRNTALAVELCQRRPRWHLSLQTHKMLGIR
CHHCCHHHHHHHHHCCCCEEEEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA