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The map label for this gene is 17546068

Identifier: 17546068

GI number: 17546068

Start: 1435881

End: 1437785

Strand: Direct

Name: 17546068

Synonym: RSc1349

Alternate gene names: NA

Gene position: 1435881-1437785 (Clockwise)

Preceding gene: 17546067

Following gene: 17546069

Centisome position: 38.64

GC content: 67.51

Gene sequence:

>1905_bases
TTGCCTACCGGGCGTACGGCCCGCACGCCATCCGTCAGCGCCGCCGGCGCGCACGCGGGGCGGCCGGCGTGGAATGTGCA
GGGCGCCATCGAGGCCATGGCCGCGCTTTCGCCGGAACGGGAGAAGCGCCTGTTCAAGAAGTCCGCCTCGCCGCAGTACC
GGTACGCCAAGGGCTTGACGGCGGAGCAGCGCGGGCAACTGGAGTCTGCGCTGGAGCAGCGGTTCCGCAATCCCGCGGCT
CCCGCCGAGGCCCGGGATTCGGCGCTGGCGATGTGGCTGTCCGTTCAGCAGGCGCGGTTGCGCACGCATACGGCCGGCCA
TCGCAATCATCACAATCTCGAGCAGTTTCAACTGGCGGCCTTGAGCGTTCCGATCCCGCTGCTGGCGCTGGGCTATCGCA
GGCAGCGGCGGCGGTACTACTCCTCGCCGCTGCGGCCGGAATATCGGACGGCGTTCAACAACTTCATGCGCGTCATCGGC
GATCCCTCGCTGAGCGAGGCGGTTCGCCAGACGGTCGCGCAGCGGCTCGAATATCACCGGCGCAGCGAAGAAACCATCGC
CCGGCACGAAAGGCAACTGCTCGGGGAGCACGGCGTAATGGGGCTTGCCGAAAGCGGGTATCAGATCGGCACGAACTACG
ATCATGTCAACCTGACCGCGCTGGAGCGGGAGGCGGTGGTCGAGAGCCGGGGAAGCGGGGTTCCACCGGCGCTGCACATC
CAGGCCTTGCAAACGGAGCGCTCGCGCGTTGAGAGCGGGGCGCTGCGGCATCAGTGGCTGACCCGCGAACTGCGCGATGC
GCAAGCGCGCGCGGGGCAAGGCGAGGCTGTCGCCGCTTCGGCCGGCCCGTCGTCTGTGCGGCAAGTCGACGCGGCGGAGT
CCAGTGCCGCCGCGGCCCGCCTGCGCCGGGATACCGCCAACGATATCAGGCGACTGCGGCGGCCGCTTGCGGCGGAGATC
AAGCAGTGGCTCAAGCTTGCGCACGCGGAGCCGTTGCCGGACCCCAAGGCTTTCGACAACGAACTGTACGCCAACGCGTT
CGCCCGTCTGCTGGAGCGCCGCCGGCCGCTGAGTCTGATCTCCTATTTCGCCCGCTGGGATCCGGTTGTCGTCGATGGGG
CGAAGGTCATCCAGGCCATTGCGAAAGACGCCAACCTGCGCAAGGAGGTGTTTGCCGCGGCGGAAACCGCCTTGGGAACC
TGCGGCGACAATGTGGCCGATGGGTTTGCCAACATCGTGACGATGGTTGACACGCATCAGCTCGTGGACGACGTGCGCAG
CGGCAAGCTGGACCAGCCGGCACTGGAGGCTTGGGGACGCCAGCGGTACCGCCTGGACAGCCTGATCACGGAAGTCAATC
AATGGATGGCGAGCCGGCGACGCCAGGCGGGGCAGCACTCCATCATGACCGAGAGGCGCGTGGCCAGGGAGCCGCTGGAA
ACGATGCTGCATGCGAAGGTCGCGTTGAAAACGGTACTCGACCTGCCCAAGAACCTTCCCTCCAGCATGCGTCATCGGCT
TGCCAGCGCGCTCAAGCCGGATGATCTGAAGCGGTTGGCCGAAACCGTGCAGGCGAAGGAAGCCGATCCGGTCGAGCTGG
CCAGGTACCTGCTCAGCAACGACGCGTGGCGTGGCGCCATGAAGGCGCTGCACCCCGCCGCGTTTGCCGCGCTGCGCAAG
CGTTTTGCTCCGGAAAAGGACGCCCTCGCCAAAGAGATACCGCCCCAGCCCACGGACCCCGAGGGGCTCGAATTCCTGGA
CGAGCGGATGGCCTATGCGGAACGCACGGATGCGTTCACGCAAAAATGCCGTGCCGCCGAGGACACACTCCTGCTGTCGC
TCGCCGGGCGCTACGCGCTCGTGCCCGCGGTGGTGGGCGCCGGGCCTTCGCAAGGCAGCCGCTAG

Upstream 100 bases:

>100_bases
AGCGGCGTCGACCGCTACCTCCACCGCTGCCACCGCGACGCGGTCGGGCCCCGCCACGGCGCCCGCTTCCGGACGATCCC
GGGAGGGCTTGCTGGCGGAG

Downstream 100 bases:

>100_bases
CGGTCCGGCGGTATCCCGCCGAGGGCTTGCCGCGCTGTGTCGCGGGCGAGGGGCGCGGCGGGGCGAGCGCGCATGGCGGA
ACGCCGTTGCGTTGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Effector Protein SspH1 Family; Type III Effector

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MPTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLTAEQRGQLESALEQRFRNPAA
PAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAALSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIG
DPSLSEAVRQTVAQRLEYHRRSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHI
QALQTERSRVESGALRHQWLTRELRDAQARAGQGEAVAASAGPSSVRQVDAAESSAAAARLRRDTANDIRRLRRPLAAEI
KQWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLISYFARWDPVVVDGAKVIQAIAKDANLRKEVFAAAETALGT
CGDNVADGFANIVTMVDTHQLVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLE
TMLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSNDAWRGAMKALHPAAFAALRK
RFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFTQKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR

Sequences:

>Translated_634_residues
MPTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLTAEQRGQLESALEQRFRNPAA
PAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAALSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIG
DPSLSEAVRQTVAQRLEYHRRSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHI
QALQTERSRVESGALRHQWLTRELRDAQARAGQGEAVAASAGPSSVRQVDAAESSAAAARLRRDTANDIRRLRRPLAAEI
KQWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLISYFARWDPVVVDGAKVIQAIAKDANLRKEVFAAAETALGT
CGDNVADGFANIVTMVDTHQLVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLE
TMLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSNDAWRGAMKALHPAAFAALRK
RFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFTQKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR
>Mature_633_residues
PTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLTAEQRGQLESALEQRFRNPAAP
AEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAALSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIGD
PSLSEAVRQTVAQRLEYHRRSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHIQ
ALQTERSRVESGALRHQWLTRELRDAQARAGQGEAVAASAGPSSVRQVDAAESSAAAARLRRDTANDIRRLRRPLAAEIK
QWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLISYFARWDPVVVDGAKVIQAIAKDANLRKEVFAAAETALGTC
GDNVADGFANIVTMVDTHQLVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLET
MLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSNDAWRGAMKALHPAAFAALRKR
FAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFTQKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70429; Mature: 70298

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHCCC
AEQRGQLESALEQRFRNPAAPAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIGDPSLSEAVRQTVAQRLEYHR
HHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHI
HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHH
QALQTERSRVESGALRHQWLTRELRDAQARAGQGEAVAASAGPSSVRQVDAAESSAAAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
LRRDTANDIRRLRRPLAAEIKQWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
SYFARWDPVVVDGAKVIQAIAKDANLRKEVFAAAETALGTCGDNVADGFANIVTMVDTHQ
HHHHHCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHC
DAWRGAMKALHPAAFAALRKRFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR
HHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHCCC
AEQRGQLESALEQRFRNPAAPAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIGDPSLSEAVRQTVAQRLEYHR
HHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHI
HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHH
QALQTERSRVESGALRHQWLTRELRDAQARAGQGEAVAASAGPSSVRQVDAAESSAAAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
LRRDTANDIRRLRRPLAAEIKQWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
SYFARWDPVVVDGAKVIQAIAKDANLRKEVFAAAETALGTCGDNVADGFANIVTMVDTHQ
HHHHHCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHC
DAWRGAMKALHPAAFAALRKRFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR
HHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA