Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 17546059

GI number: 17546059

Start: 1427845

End: 1428639

Strand: Direct

Name: ssuC [H]

Synonym: RSc1340

Alternate gene names: 17546059

Gene position: 1427845-1428639 (Clockwise)

Preceding gene: 17546058

Following gene: 17546060

Centisome position: 38.42

GC content: 68.93

Gene sequence:

>795_bases
ATGGCATCGAAACCCAAGCATGTTCTGAAGGCCGCGCGCGCGCGCCTGACGCCGTGGCTCGTGCCGCTGGCGCTGCTGGC
GGCGTGGCAGGCCGCGGCCCAATGGGGCTGGCTGTCGAACCGCATCCTGCCGGCGCCGCTGGACGTCGCGCGCTCGGCCA
TTGAGCTGGCGCGCTCGGGCGAGCTGTGGAAGCACGTGGCGGTCAGCACCTGGCGCGCGCTGCTGGGCTTTGCGATCGGC
GGCTCGCTGGGGCTGGCGCTGGGGCTGCTGACCGGCACCTTCCGCACGGCCGAGACGCTGCTCGACACCACGCTGCAGAT
GATCCGCAACATCCCGGTGCTGGCGCTGATTCCGCTGGTGATCCTGTGGTTCGGCATCGATGAATCGGCCAAGCTGTTCC
TGGTGTCGCTGGGCGTGTTCTTCCCGATCTACCTGAACACGTACCACGGCATCCGCGCGGTGGACCCGGCGCTGGTGGAG
ATGGCGCGCAGCTACGGCCTGTCGCGCGCGCGGCTGTACCGCGAGGTGATTCTGCCGGGGGCGCTGCCGCAGATCCTGGT
GGGGGTGCGCTTCTCGCTGGGGCTGATGTGGGTGACGCTGATCGTCGCGGAGACCGTCTCCGCGCAGGCCGGCATCGGCT
ACATGACGATGAATGCGCGCGAGTTCCTGCAGACCGACGTGGTGCTGCTCGGCATCCTGCTTTATGCGCTGCTGGGCAAG
CTGGCCGACCTGCTGTCGCGCGCGCTGGAACGGTTCTGGCTGCGCTGGCATCCGGGCTATCAAGCGGCAACCTGA

Upstream 100 bases:

>100_bases
TGCGCGACACGTTGCCGGGCAGCGTGCTGAACGGGCCGTTCGGTGAGGTGATCGCCACGGGCATCGTGCCCCGGGTGGCG
GCGAGCTGAGGGGCAGGGCG

Downstream 100 bases:

>100_bases
GAGGAGAGTACGCACCATGCAAAGCAACGCCACCGAGCATGCCGCGCTGGAGCGCGTGGCGCCCCGCGGCACTGCGCTGC
GCATCGCGCACGCGGTCAAG

Product: aliphatic sulfonate ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MASKPKHVLKAARARLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSGELWKHVAVSTWRALLGFAIG
GSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVE
MARSYGLSRARLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGK
LADLLSRALERFWLRWHPGYQAAT

Sequences:

>Translated_264_residues
MASKPKHVLKAARARLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSGELWKHVAVSTWRALLGFAIG
GSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVE
MARSYGLSRARLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGK
LADLLSRALERFWLRWHPGYQAAT
>Mature_263_residues
ASKPKHVLKAARARLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSGELWKHVAVSTWRALLGFAIGG
SLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVEM
ARSYGLSRARLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGKL
ADLLSRALERFWLRWHPGYQAAT

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=66.8016194331984, Blast_Score=313, Evalue=7e-87,
Organism=Escherichia coli, GI1786564, Length=242, Percent_Identity=37.603305785124, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29050; Mature: 28919

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKPKHVLKAARARLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSG
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
ELWKHVAVSTWRALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVEMARSYGLSRARLYREVILPG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHHCCC
ALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
LADLLSRALERFWLRWHPGYQAAT
HHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ASKPKHVLKAARARLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSG
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
ELWKHVAVSTWRALLGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRAVDPALVEMARSYGLSRARLYREVILPG
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHHCCC
ALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
LADLLSRALERFWLRWHPGYQAAT
HHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]