Click here to switch to the map view.

The map label for this gene is ssuA1 [H]

Identifier: 17546057

GI number: 17546057

Start: 1425633

End: 1426643

Strand: Direct

Name: ssuA1 [H]

Synonym: RSc1338

Alternate gene names: 17546057

Gene position: 1425633-1426643 (Clockwise)

Preceding gene: 17546056

Following gene: 17546058

Centisome position: 38.36

GC content: 73.1

Gene sequence:

>1011_bases
ATGACGATCGATATCCAACGCCGGCACTGGCTAGCCGCCACCGCGGCGGGGGCCTCGCTGGCGGCGCTCGGGCCCCTGGC
GCGCGGGGCCGATGCGGCCACGCTGCCCAACATCGTGCCGCCCGCGCAGCTGCGCATCGGCTTCCAGAAGAGCGCCGTCA
ACCTGGTGATCGTCAAGGAAAGCCGCGCGCTGGAGCAGCGCTTTCCCGACACCCGGGTGCACTGGCTGGAGTTTCCCGCC
GGGCCGCAGCAACTGGAGGCGCTGTCGGCCGGCAGCCTGGATGTCGCCATCACGGGGGATACGCCGCCGGTGTTCGCGCA
GGCCGCCGGCCGCGACCTGCGCTACATCGGCGTCGAGCCGCCCAAGCCGGACAGCTCGGCGATCGTGGTGCCGCGGGGCT
CGGCGCTCCAGGCGCTGGCCGACCTGAAGGGCAAGCGCGTGGCGCTGCAGAAAGGCTCGAGCGCGCATTTCCTGGTCGTC
AGCGGCCTGCGCAAGGGCGGGTTGACCTTTGCCGACATCCAGCCCGTCTACCTGACCCCCGCCGATGCGCGCGCCGCCTT
CGAGCGCGGCAGTGTCGACGCCTGGGGCATCTGGGACCCGTACTACGCCGCCACCGAACTGGCGATCGGGCCGCGCGTGC
TGGCCACCGGGCGCGGGCTGTCGTCCAACAACACGTTCTATTTCGCGCCGCGCGCCTTTGCCGAGCAGCACGGCGACACC
ATCGCCGCGCTGTTCGCCGAGCTCGCGCGCGCCGACCGCCTGGTGCAGCAGAACCGCAAGGAGGCCGCCCAGCGCATCGC
CGAGTTCTCCGGGCTGTCGCTGGCGACGGTGCACCTGTTCCTGTCGCGCAGGCCGCCGTCGCCGGTGCGGCCGGTCACGC
CCGAGGCGATTGCCGAGCAGCAGCGCGTGGCCGATGCCTTCCATGGCCTGGGGCTGATCCCGCGCCCGGTGCGGCCGGCC
GACCTCGTCTGGCAGCCGACGCCCGCGCAGCTGGCCATCGCCCGCGCCTGA

Upstream 100 bases:

>100_bases
CGCGCGGCGTGTTCCGCTTGTCTGCTACGCCGCGCACCCACTGCGCGCGGACGATGCCGTTCGCCGCTGTCCGATTTTTC
CCGATTGTGAGAAACGCATC

Downstream 100 bases:

>100_bases
TCCGATCCGATTCGAGGAGTTTCGTCATGCAAGTCTTCTGGTTCCTTCCCACGCACGGCGACAGCCGCTATCTCGGCACG
GCCGAGGGCGCGCGCCAGGT

Product: alkanesulfonates binding precursor signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTIDIQRRHWLAATAAGASLAALGPLARGADAATLPNIVPPAQLRIGFQKSAVNLVIVKESRALEQRFPDTRVHWLEFPA
GPQQLEALSAGSLDVAITGDTPPVFAQAAGRDLRYIGVEPPKPDSSAIVVPRGSALQALADLKGKRVALQKGSSAHFLVV
SGLRKGGLTFADIQPVYLTPADARAAFERGSVDAWGIWDPYYAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDT
IAALFAELARADRLVQQNRKEAAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQQRVADAFHGLGLIPRPVRPA
DLVWQPTPAQLAIARA

Sequences:

>Translated_336_residues
MTIDIQRRHWLAATAAGASLAALGPLARGADAATLPNIVPPAQLRIGFQKSAVNLVIVKESRALEQRFPDTRVHWLEFPA
GPQQLEALSAGSLDVAITGDTPPVFAQAAGRDLRYIGVEPPKPDSSAIVVPRGSALQALADLKGKRVALQKGSSAHFLVV
SGLRKGGLTFADIQPVYLTPADARAAFERGSVDAWGIWDPYYAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDT
IAALFAELARADRLVQQNRKEAAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQQRVADAFHGLGLIPRPVRPA
DLVWQPTPAQLAIARA
>Mature_335_residues
TIDIQRRHWLAATAAGASLAALGPLARGADAATLPNIVPPAQLRIGFQKSAVNLVIVKESRALEQRFPDTRVHWLEFPAG
PQQLEALSAGSLDVAITGDTPPVFAQAAGRDLRYIGVEPPKPDSSAIVVPRGSALQALADLKGKRVALQKGSSAHFLVVS
GLRKGGLTFADIQPVYLTPADARAAFERGSVDAWGIWDPYYAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDTI
AALFAELARADRLVQQNRKEAAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQQRVADAFHGLGLIPRPVRPAD
LVWQPTPAQLAIARA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=287, Percent_Identity=49.1289198606272, Blast_Score=301, Evalue=5e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35921; Mature: 35790

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDIQRRHWLAATAAGASLAALGPLARGADAATLPNIVPPAQLRIGFQKSAVNLVIVKE
CEEECCCCCEEEEHHCCCHHHHHCCHHCCCCCCCCCCCCCCHHEEEEEECCCEEEEEEEC
SRALEQRFPDTRVHWLEFPAGPQQLEALSAGSLDVAITGDTPPVFAQAAGRDLRYIGVEP
CHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEEEECCC
PKPDSSAIVVPRGSALQALADLKGKRVALQKGSSAHFLVVSGLRKGGLTFADIQPVYLTP
CCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCEEEECCEEEECC
ADARAAFERGSVDAWGIWDPYYAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDT
CHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCHHHHHHCCCH
IAALFAELARADRLVQQNRKEAAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCHHHHHHH
QRVADAFHGLGLIPRPVRPADLVWQPTPAQLAIARA
HHHHHHHHCCCCCCCCCCCCCEEECCCCHHEEEECC
>Mature Secondary Structure 
TIDIQRRHWLAATAAGASLAALGPLARGADAATLPNIVPPAQLRIGFQKSAVNLVIVKE
EEECCCCCEEEEHHCCCHHHHHCCHHCCCCCCCCCCCCCCHHEEEEEECCCEEEEEEEC
SRALEQRFPDTRVHWLEFPAGPQQLEALSAGSLDVAITGDTPPVFAQAAGRDLRYIGVEP
CHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEEEECCC
PKPDSSAIVVPRGSALQALADLKGKRVALQKGSSAHFLVVSGLRKGGLTFADIQPVYLTP
CCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCEEEECCEEEECC
ADARAAFERGSVDAWGIWDPYYAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDT
CHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCHHHHHHCCCH
IAALFAELARADRLVQQNRKEAAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCHHHHHHH
QRVADAFHGLGLIPRPVRPADLVWQPTPAQLAIARA
HHHHHHHHCCCCCCCCCCCCCEEECCCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]