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The map label for this gene is fixN [H]

Identifier: 17545995

GI number: 17545995

Start: 1359455

End: 1360912

Strand: Direct

Name: fixN [H]

Synonym: RSc1276

Alternate gene names: 17545995

Gene position: 1359455-1360912 (Clockwise)

Preceding gene: 17545994

Following gene: 17545996

Centisome position: 36.58

GC content: 62.83

Gene sequence:

>1458_bases
ATGGATGCATCCAGCGCGTTACAGCACGCCCAGACGTTCAATTACCGCGTTGTCCGCCAGTTCTCGATCATGACGATCGT
CTGGGGCATCGTCGGCATGGCGGTCGGCGTGCTGATCGCGGCACAGTTGATCTGGCCGCAACTGAATTTTGGGGTGCCCT
GGCTGACATATGGGCGACTGCGTCCGCTGCATACCAATGCCGTCATCTTCGCCTTCGGCGGCAGCGCGCTGTTTGCCACG
TCGTATTACGTCGTCCAGCGCACCTGCCAGGCGCGGTTGGTTTCCGACGCGCTCGCGGCCTTCACGTTCTGGGGCTGGCA
GGCCGTCATCGTGGCGGCGGCCATCACGCTGCCGCTGGGCTACACCAGTTCGAAGGAGTACGCAGAGCTGGAGTGGCCGA
TCGACATCCTGATCACCGTGGTGTGGGTGGTGTACGCCATCGTCTTCTTCGGCACCATCCTCAAGCGCAAGACCCGGCAC
ATCTACGTCGCCAACTGGTTCTTCGGCGCCTACATCCTCACCATCGCGCTGCTGCATATCGTCAATAACGCCGAGCTGCC
GGTGTCGATGTGGAAGTCGTACTCGGCCTACGCCGGCGTGCAGGACGCGATGGTGCAGTGGTGGTACGGCCATAACGCGG
TGGGCTTCTTCCTGACCACCAGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGAGCGCCCGATCTATTCG
TACCGCCTGTCGATCGTCCACTTCTGGGCACTGAACTTTACCTACATGTGGGCGGGCCCGCACCACCTGCAATACACCGC
GCTGCCGGACTGGGCTCAGTCGCTGGGCATGGTGTTTTCGCTGATCCTGCTCGCGCCGTCGTGGGGCGGCATGATCAACG
GGATCATGACGATGTCCGGCGCCTGGCACAAGCTGCGCACCGACCCGATCCTCAAGTTCCTAGTGGTGGCGCTGTCGTTC
TACGGCATGGCGACCTTCGAGGGCTCGATGATGTCGATCAAGACCGTCAACGGGCTGTCGCACTACACCGACTGGACCAT
CGGCCACGTGCATTCCGGCGCGCTGGGCTGGGTGGCGATGATCACCATCGGCTCGATGTACTACATGATCCCGCGCCTGT
TCGGGCGGCAGAAGATGTATAGCACGCGGCTGATCGAGGTGCACTTCTGGGTGGCCACCATCGGCGTGGTGCTCTATATC
GCGGCCATGTGGGTCGCCGGTGTGATGCAGGGCCTGATGTGGCGCGCCACCGAGCCCGACGGCACGCTGACCTACAGCTT
TGTCGAGGCGGTGAAGGCAACGTATCCGTTCTACGCGATCCGTCTGCTGGGTGGCCTGTGCTTCCTCGGAGGCATGCTGC
TGATGGCCTTCAACGTGCTCAAGACCCTCCAGGGCAGCCGGGCCGTGGATGCGCCGATTCCTCAAGCCGCGCAGATGCCC
CTGCCGGCGGCACAGTGA

Upstream 100 bases:

>100_bases
TCCGGCTCGCTGGACGGGGGTGCCTTGACGCATATCAAAACCTGCAAGGCATCTGATTTTTAACATGTGCATATCACTAC
AACCATCACGGGGAGCGAGC

Downstream 100 bases:

>100_bases
GGAGACCGACATGAGCAACCAACCTTCCCGCTTCTTCTCGCACGAGACGCTGGAAAAGAACATCGGCCTGCTGATCATCA
TGACGTTGGTCGTGGTCAGC

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MDASSALQHAQTFNYRVVRQFSIMTIVWGIVGMAVGVLIAAQLIWPQLNFGVPWLTYGRLRPLHTNAVIFAFGGSALFAT
SYYVVQRTCQARLVSDALAAFTFWGWQAVIVAAAITLPLGYTSSKEYAELEWPIDILITVVWVVYAIVFFGTILKRKTRH
IYVANWFFGAYILTIALLHIVNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTMSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNGLSHYTDWTIGHVHSGALGWVAMITIGSMYYMIPRLFGRQKMYSTRLIEVHFWVATIGVVLYI
AAMWVAGVMQGLMWRATEPDGTLTYSFVEAVKATYPFYAIRLLGGLCFLGGMLLMAFNVLKTLQGSRAVDAPIPQAAQMP
LPAAQ

Sequences:

>Translated_485_residues
MDASSALQHAQTFNYRVVRQFSIMTIVWGIVGMAVGVLIAAQLIWPQLNFGVPWLTYGRLRPLHTNAVIFAFGGSALFAT
SYYVVQRTCQARLVSDALAAFTFWGWQAVIVAAAITLPLGYTSSKEYAELEWPIDILITVVWVVYAIVFFGTILKRKTRH
IYVANWFFGAYILTIALLHIVNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTMSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNGLSHYTDWTIGHVHSGALGWVAMITIGSMYYMIPRLFGRQKMYSTRLIEVHFWVATIGVVLYI
AAMWVAGVMQGLMWRATEPDGTLTYSFVEAVKATYPFYAIRLLGGLCFLGGMLLMAFNVLKTLQGSRAVDAPIPQAAQMP
LPAAQ
>Mature_485_residues
MDASSALQHAQTFNYRVVRQFSIMTIVWGIVGMAVGVLIAAQLIWPQLNFGVPWLTYGRLRPLHTNAVIFAFGGSALFAT
SYYVVQRTCQARLVSDALAAFTFWGWQAVIVAAAITLPLGYTSSKEYAELEWPIDILITVVWVVYAIVFFGTILKRKTRH
IYVANWFFGAYILTIALLHIVNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTMSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNGLSHYTDWTIGHVHSGALGWVAMITIGSMYYMIPRLFGRQKMYSTRLIEVHFWVATIGVVLYI
AAMWVAGVMQGLMWRATEPDGTLTYSFVEAVKATYPFYAIRLLGGLCFLGGMLLMAFNVLKTLQGSRAVDAPIPQAAQMP
LPAAQ

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 54457; Mature: 54457

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASSALQHAQTFNYRVVRQFSIMTIVWGIVGMAVGVLIAAQLIWPQLNFGVPWLTYGRL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
RPLHTNAVIFAFGGSALFATSYYVVQRTCQARLVSDALAAFTFWGWQAVIVAAAITLPLG
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YTSSKEYAELEWPIDILITVVWVVYAIVFFGTILKRKTRHIYVANWFFGAYILTIALLHI
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
VNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
HCCCCCCHHHHHCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTMSG
HHHHHHHEEECCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNGLSHYTDWTIGHVHSGALGWVAM
CHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHCCCCHHCCCCCHHHHHHH
ITIGSMYYMIPRLFGRQKMYSTRLIEVHFWVATIGVVLYIAAMWVAGVMQGLMWRATEPD
HHHHHHHHHHHHHHCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GTLTYSFVEAVKATYPFYAIRLLGGLCFLGGMLLMAFNVLKTLQGSRAVDAPIPQAAQMP
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LPAAQ
CCCCC
>Mature Secondary Structure
MDASSALQHAQTFNYRVVRQFSIMTIVWGIVGMAVGVLIAAQLIWPQLNFGVPWLTYGRL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
RPLHTNAVIFAFGGSALFATSYYVVQRTCQARLVSDALAAFTFWGWQAVIVAAAITLPLG
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YTSSKEYAELEWPIDILITVVWVVYAIVFFGTILKRKTRHIYVANWFFGAYILTIALLHI
CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
VNNAELPVSMWKSYSAYAGVQDAMVQWWYGHNAVGFFLTTSFLGMMYYFVPKQAERPIYS
HCCCCCCHHHHHCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIVHFWALNFTYMWAGPHHLQYTALPDWAQSLGMVFSLILLAPSWGGMINGIMTMSG
HHHHHHHEEECCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNGLSHYTDWTIGHVHSGALGWVAM
CHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCHHHCCCCHHCCCCCHHHHHHH
ITIGSMYYMIPRLFGRQKMYSTRLIEVHFWVATIGVVLYIAAMWVAGVMQGLMWRATEPD
HHHHHHHHHHHHHHCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GTLTYSFVEAVKATYPFYAIRLLGGLCFLGGMLLMAFNVLKTLQGSRAVDAPIPQAAQMP
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LPAAQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]