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The map label for this gene is yhcM [H]

Identifier: 17545991

GI number: 17545991

Start: 1354476

End: 1355573

Strand: Direct

Name: yhcM [H]

Synonym: RSc1272

Alternate gene names: 17545991

Gene position: 1354476-1355573 (Clockwise)

Preceding gene: 17545990

Following gene: 17545993

Centisome position: 36.45

GC content: 66.76

Gene sequence:

>1098_bases
ATGAACGTCCAGGAAACCTACCTGAAGGAACTGAAGGCGCGCGGCTACCAGCCCGACGAGGCGCAGCAGCGCGCGGTCGA
TCGCCTGCAGCTGTGCTACGACGAATGGGTGGCCTACAAGGCCAGGCGTTCAAGCGCCCTGCGCAAGCTGCTGGTGCGCC
CGGAGCTGCCGCGCGGCGTCTACATGTGGGGCGGGGTGGGGCGCGGCAAGTCGTTCCTGATGGATGCCTTCTACAGCTGC
GTGCCGGTGGTGCGCAAGACGCGCCTGCACTTCCACGAGTTCATGCGCGAGGTGCACCGCCAGCTCGAAGAGCTGCGTGG
CCGCGCCGATCCGCTCGACGAACTCGCACGCCGCATCGCCAAGCGCTATCGCCTGATCTGCTTCGATGAATTCCACGTCA
GCGACGTCGCCGATGCGATGATCCTGCACCGCCTGCTCGATCAGCTCTTCGCCAACGGCGTGCAGTTCGTGATGACGTCC
AACTACCGCCCGGACCTGCTGTACCCGGACGGCCTGCACCGCGACCGCGTGCTGCCCGCCATCGCCCTGCTGCAGGAGAA
GCTCGACGTCCTCAATGTCGATGCCGGCATCGACTACCGCAAGCGTGCCATGGAGCAGGTGCAGGCCTACCACACGCCGC
TGGGCGCCCAGGCCAACTCGGCGCTGCGCGACGCGTTTGCCGCGGTGGCCGAGGCGCCGGACGAATCGCCCATCCTGCAT
ATCGAGCACCGCGAGATCCGTGCGCAGCGCAAGGCCGGCGGCGTGGTGTGGTTCGACTTCGCCACGCTGTGCGGCGGACC
GCGCTCGCAGAACGACTACCTGGAGATCGCCGCGCGTTTCCATACCGTCATCCTCGCCGATGTGCCGAAGATGACGCCGC
GCATGGCCTCCGAGGCGCGCCGCTTCACCTGGCTGATCGACGTGCTGTACGACCACAAGGTCAAGCTGCTGATGTCGGCG
GAGGTGCCGGCGGACGCGCTCTACACCGAAGGCCAGATGGCCAACGAATTCCACCGCACGGTGTCGCGCATCATCGAGAT
GCAGTCGCGCGAATACCTCGAGGCACCGCGCCGCGCGGTCGATACGACACTGACCTGA

Upstream 100 bases:

>100_bases
AACATGTAATCGCACGCCATCAGGCGAGCACGGTGCCCGGTCATCCACAAGATGCCGGGCATCGGTCCATTTGGGCCACC
GAACGGCCGGCCCCACGCAG

Downstream 100 bases:

>100_bases
TGCCGCCTCAGCGCGGCGGCATCGGGTTGCGATGCGAGGCCGGCGTCGGGCGCAAGGCGCGCAGGCCGGCGGCACCGAGC
AGGTCCGGTGACAGCATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNVQETYLKELKARGYQPDEAQQRAVDRLQLCYDEWVAYKARRSSALRKLLVRPELPRGVYMWGGVGRGKSFLMDAFYSC
VPVVRKTRLHFHEFMREVHRQLEELRGRADPLDELARRIAKRYRLICFDEFHVSDVADAMILHRLLDQLFANGVQFVMTS
NYRPDLLYPDGLHRDRVLPAIALLQEKLDVLNVDAGIDYRKRAMEQVQAYHTPLGAQANSALRDAFAAVAEAPDESPILH
IEHREIRAQRKAGGVVWFDFATLCGGPRSQNDYLEIAARFHTVILADVPKMTPRMASEARRFTWLIDVLYDHKVKLLMSA
EVPADALYTEGQMANEFHRTVSRIIEMQSREYLEAPRRAVDTTLT

Sequences:

>Translated_365_residues
MNVQETYLKELKARGYQPDEAQQRAVDRLQLCYDEWVAYKARRSSALRKLLVRPELPRGVYMWGGVGRGKSFLMDAFYSC
VPVVRKTRLHFHEFMREVHRQLEELRGRADPLDELARRIAKRYRLICFDEFHVSDVADAMILHRLLDQLFANGVQFVMTS
NYRPDLLYPDGLHRDRVLPAIALLQEKLDVLNVDAGIDYRKRAMEQVQAYHTPLGAQANSALRDAFAAVAEAPDESPILH
IEHREIRAQRKAGGVVWFDFATLCGGPRSQNDYLEIAARFHTVILADVPKMTPRMASEARRFTWLIDVLYDHKVKLLMSA
EVPADALYTEGQMANEFHRTVSRIIEMQSREYLEAPRRAVDTTLT
>Mature_365_residues
MNVQETYLKELKARGYQPDEAQQRAVDRLQLCYDEWVAYKARRSSALRKLLVRPELPRGVYMWGGVGRGKSFLMDAFYSC
VPVVRKTRLHFHEFMREVHRQLEELRGRADPLDELARRIAKRYRLICFDEFHVSDVADAMILHRLLDQLFANGVQFVMTS
NYRPDLLYPDGLHRDRVLPAIALLQEKLDVLNVDAGIDYRKRAMEQVQAYHTPLGAQANSALRDAFAAVAEAPDESPILH
IEHREIRAQRKAGGVVWFDFATLCGGPRSQNDYLEIAARFHTVILADVPKMTPRMASEARRFTWLIDVLYDHKVKLLMSA
EVPADALYTEGQMANEFHRTVSRIIEMQSREYLEAPRRAVDTTLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=412, Percent_Identity=33.495145631068, Blast_Score=233, Evalue=2e-61,
Organism=Escherichia coli, GI1789627, Length=360, Percent_Identity=45.8333333333333, Blast_Score=298, Evalue=3e-82,
Organism=Caenorhabditis elegans, GI17505769, Length=344, Percent_Identity=35.4651162790698, Blast_Score=211, Evalue=6e-55,
Organism=Saccharomyces cerevisiae, GI6320783, Length=326, Percent_Identity=33.1288343558282, Blast_Score=172, Evalue=6e-44,
Organism=Drosophila melanogaster, GI20129913, Length=347, Percent_Identity=35.4466858789625, Blast_Score=199, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42145; Mature: 42145

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQETYLKELKARGYQPDEAQQRAVDRLQLCYDEWVAYKARRSSALRKLLVRPELPRGV
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
YMWGGVGRGKSFLMDAFYSCVPVVRKTRLHFHEFMREVHRQLEELRGRADPLDELARRIA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KRYRLICFDEFHVSDVADAMILHRLLDQLFANGVQFVMTSNYRPDLLYPDGLHRDRVLPA
HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHH
IALLQEKLDVLNVDAGIDYRKRAMEQVQAYHTPLGAQANSALRDAFAAVAEAPDESPILH
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
IEHREIRAQRKAGGVVWFDFATLCGGPRSQNDYLEIAARFHTVILADVPKMTPRMASEAR
EHHHHHHHHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFTWLIDVLYDHKVKLLMSAEVPADALYTEGQMANEFHRTVSRIIEMQSREYLEAPRRAV
HHHHHHHHHHHHHHHEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTTLT
CCCCC
>Mature Secondary Structure
MNVQETYLKELKARGYQPDEAQQRAVDRLQLCYDEWVAYKARRSSALRKLLVRPELPRGV
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
YMWGGVGRGKSFLMDAFYSCVPVVRKTRLHFHEFMREVHRQLEELRGRADPLDELARRIA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KRYRLICFDEFHVSDVADAMILHRLLDQLFANGVQFVMTSNYRPDLLYPDGLHRDRVLPA
HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHH
IALLQEKLDVLNVDAGIDYRKRAMEQVQAYHTPLGAQANSALRDAFAAVAEAPDESPILH
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
IEHREIRAQRKAGGVVWFDFATLCGGPRSQNDYLEIAARFHTVILADVPKMTPRMASEAR
EHHHHHHHHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFTWLIDVLYDHKVKLLMSAEVPADALYTEGQMANEFHRTVSRIIEMQSREYLEAPRRAV
HHHHHHHHHHHHHHHEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTTLT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]