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The map label for this gene is 17545973

Identifier: 17545973

GI number: 17545973

Start: 1332977

End: 1333951

Strand: Direct

Name: 17545973

Synonym: RSc1254

Alternate gene names: NA

Gene position: 1332977-1333951 (Clockwise)

Preceding gene: 17545972

Following gene: 17545974

Centisome position: 35.87

GC content: 67.69

Gene sequence:

>975_bases
ATGTTCGACTGGGTCGCCGACACCTTCACCCAAGCGCAGGACCTGCTGTTCCAGCATGTCGTGATGCCGCTCACCTATGC
CATCGGCATGGGCGGCTACGTGGAGGATGCCTATCCCGGCACCGAATGGCTGCTGATGGGCCTGGTGCAGATTGCCGTGA
TGCTGCTGGTGCTGCGGCCGCTGGAGCGCTGGCGCCCCGTGGAGCCGATGCAGGATCGCGGCGCCGTGCGGGCGGACATC
GTCTACACGCTGTTCCACCGGCTCGGCCTGTTCCCGCTGCTGCTGTTCTTCACGCTGCAGCCGCTGATCGACGCGCTCGA
CGGCAAGCTGCGCTTCTGGGGCTGGGCCCACCTGAACGTGGAGGACTGGTGGCCCGGCGTGACCTCCATCCCCATCGTCA
GCTTCCTGGTCTACCTGGTGCTGTTCGACCTGCTCGACTACGCGTACCACCGCCTGTCGCACACCTTCCACTGGTGGTGG
AACCTGCACGCGCTGCACCACAGCCAGCAGCAGATGACACTGTGGTCCGACGACCGCAATCACCTCTTCGACGATCTGCT
GCACGGCACGGTGTTCGCCGTCGCGGCATTGGTGATCGGCGTGGAGCCGTCGCAGTACGTGCTGCTGGTCGCCATCTCGC
AGTTGCTGCAGAGCCTGCAGCACGCCAATGTGCGGCTGCATTTCGGCTGGCTGGGCGATCGGCTGCTGATCTCGCCCCGC
TTCCATCGGCTGCACCACGCCATCGGCCTGGGGCACGAGGTGCCGGGCAAGCCGGGCGTGCTGGGCGGTTGCAATTTCGG
CGTGCTGTTCCCGTGGTGGGACATGCTGCTCGGCACCGCCGTCTTCTCGCCCGAATACCACGCCACCGGCATCCGCGACC
AGCTGCCCGCGCCGCGCGGCCGCTCGCGCGACTACGGGCGCGGCGTGCTGCGCCAGCAGTGGCTGGGCGTCAAGCGCCTG
CTCGGCCGCGCCTGA

Upstream 100 bases:

>100_bases
CTGATCACCGGCCTGGAGCGCAAGGGCTTCTGCTTCGCCACGCTGCGCGACCATCCGCAGTACCAGGCGTGGTTCGCCGC
CCACCCGCCGGCCCGCTGAC

Downstream 100 bases:

>100_bases
GCGTGTGCGTGCAGCGGCGTGGTCCGCTGCGCTGCTGTGCTAGGCTTGTCCGCATCCTGAACTCCCGATTTCCGCATGAA
CGACCTCATCCGCTCGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Sterol Desaturase; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MFDWVADTFTQAQDLLFQHVVMPLTYAIGMGGYVEDAYPGTEWLLMGLVQIAVMLLVLRPLERWRPVEPMQDRGAVRADI
VYTLFHRLGLFPLLLFFTLQPLIDALDGKLRFWGWAHLNVEDWWPGVTSIPIVSFLVYLVLFDLLDYAYHRLSHTFHWWW
NLHALHHSQQQMTLWSDDRNHLFDDLLHGTVFAVAALVIGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLLGTAVFSPEYHATGIRDQLPAPRGRSRDYGRGVLRQQWLGVKRL
LGRA

Sequences:

>Translated_324_residues
MFDWVADTFTQAQDLLFQHVVMPLTYAIGMGGYVEDAYPGTEWLLMGLVQIAVMLLVLRPLERWRPVEPMQDRGAVRADI
VYTLFHRLGLFPLLLFFTLQPLIDALDGKLRFWGWAHLNVEDWWPGVTSIPIVSFLVYLVLFDLLDYAYHRLSHTFHWWW
NLHALHHSQQQMTLWSDDRNHLFDDLLHGTVFAVAALVIGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLLGTAVFSPEYHATGIRDQLPAPRGRSRDYGRGVLRQQWLGVKRL
LGRA
>Mature_324_residues
MFDWVADTFTQAQDLLFQHVVMPLTYAIGMGGYVEDAYPGTEWLLMGLVQIAVMLLVLRPLERWRPVEPMQDRGAVRADI
VYTLFHRLGLFPLLLFFTLQPLIDALDGKLRFWGWAHLNVEDWWPGVTSIPIVSFLVYLVLFDLLDYAYHRLSHTFHWWW
NLHALHHSQQQMTLWSDDRNHLFDDLLHGTVFAVAALVIGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLLGTAVFSPEYHATGIRDQLPAPRGRSRDYGRGVLRQQWLGVKRL
LGRA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37262; Mature: 37262

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWVADTFTQAQDLLFQHVVMPLTYAIGMGGYVEDAYPGTEWLLMGLVQIAVMLLVLRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LERWRPVEPMQDRGAVRADIVYTLFHRLGLFPLLLFFTLQPLIDALDGKLRFWGWAHLNV
HHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
EDWWPGVTSIPIVSFLVYLVLFDLLDYAYHRLSHTFHWWWNLHALHHSQQQMTLWSDDRN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHCCCHHCEEECCCHH
HLFDDLLHGTVFAVAALVIGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECHH
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLLGTAVFSPEYHATGIRDQLPAPRG
HHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
RSRDYGRGVLRQQWLGVKRLLGRA
CCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDWVADTFTQAQDLLFQHVVMPLTYAIGMGGYVEDAYPGTEWLLMGLVQIAVMLLVLRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LERWRPVEPMQDRGAVRADIVYTLFHRLGLFPLLLFFTLQPLIDALDGKLRFWGWAHLNV
HHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
EDWWPGVTSIPIVSFLVYLVLFDLLDYAYHRLSHTFHWWWNLHALHHSQQQMTLWSDDRN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHCCCHHCEEECCCHH
HLFDDLLHGTVFAVAALVIGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECHH
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLLGTAVFSPEYHATGIRDQLPAPRG
HHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
RSRDYGRGVLRQQWLGVKRLLGRA
CCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA