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The map label for this gene is 17545972

Identifier: 17545972

GI number: 17545972

Start: 1332154

End: 1332975

Strand: Direct

Name: 17545972

Synonym: RSc1253

Alternate gene names: NA

Gene position: 1332154-1332975 (Clockwise)

Preceding gene: 17545971

Following gene: 17545973

Centisome position: 35.85

GC content: 71.05

Gene sequence:

>822_bases
ATGCAGTCCGTTCTGCCGATGCTGCGCTCGGTGGCCGCCGCCGTGGCCCTCGGAGCCTGCGCGTTCGCCGTGGCGGCGCC
GGGCGGCGTCAATGCGGGCGCGTGCAAGGGCACGGTCTACCTGACGTTCGACACCGGCAGCATGAGCCAGGCTCAGCTGA
TTGCCGACACGCTGCGCCGGCACCGCATCCGGGCCACTTTCTTCCTCGCCAACGAACAGACCATCCACGGCGACAGCACG
CTCGACGACGCCTGGGCGCCGTACTGGAAGTCGCTCGCCGCCGATGGCCACGCCTTCGGCACGCATACCTTCGATCACGT
CTACTACAAGGGCGAGGCCGGTCCGGACAAGGTCCGCTTCCGCCCGCAGTTCGGCGCGCAGGGCGGCCGCAATGTCGTCT
GGGGCGAGCCGGAATTCTGCGCCGAGCTCAAGCGCAGCGCCGATCGCTTCCATGCCATGACCGGCCAGCCGATCGACCCG
CTGTGGCGCGCGCCGGGCGGTCACCTGTCGGCCGTCACCGAGGGCTGGGCCAAGCAGTGCGGCTTCGCGCATGTGGCGTG
GGCCCCGGCCGGCTTCCTCGGCGACGAGCTGCCCTCCGAGCGCTATCCGAACGCCATGCTGCTCGACAAGGCCCTGGCCA
ACCTGCGCGACGGCGACATCACCATGGCCCACCTGGGCATCTGGTCGCGCAAGGACCCGTGGGCCCCGGCCGACCTGGAG
CCGCTGATCACCGGCCTGGAGCGCAAGGGCTTCTGCTTCGCCACGCTGCGCGACCATCCGCAGTACCAGGCGTGGTTCGC
CGCCCACCCGCCGGCCCGCTGA

Upstream 100 bases:

>100_bases
GACGTGGCCAGCCGCAAGGTGGTCGAAGAAATCAAGGTGGGGCGCTCGCCGCACGGCATCTATTTCCGCACGCGCGCGCC
GCTGATCTGAGGGGATGGCC

Downstream 100 bases:

>100_bases
CATGTTCGACTGGGTCGCCGACACCTTCACCCAAGCGCAGGACCTGCTGTTCCAGCATGTCGTGATGCCGCTCACCTATG
CCATCGGCATGGGCGGCTAC

Product: lipoprotein signal peptide

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Exported Polysaccharide Deacetylase; Lipoprotein Glycoside Hydrolase/Deacetylase; Lipoprotein Putative Polysaccharide Deacetylase; Polysaccharide Deacetylase Family

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MQSVLPMLRSVAAAVALGACAFAVAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRRHRIRATFFLANEQTIHGDST
LDDAWAPYWKSLAADGHAFGTHTFDHVYYKGEAGPDKVRFRPQFGAQGGRNVVWGEPEFCAELKRSADRFHAMTGQPIDP
LWRAPGGHLSAVTEGWAKQCGFAHVAWAPAGFLGDELPSERYPNAMLLDKALANLRDGDITMAHLGIWSRKDPWAPADLE
PLITGLERKGFCFATLRDHPQYQAWFAAHPPAR

Sequences:

>Translated_273_residues
MQSVLPMLRSVAAAVALGACAFAVAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRRHRIRATFFLANEQTIHGDST
LDDAWAPYWKSLAADGHAFGTHTFDHVYYKGEAGPDKVRFRPQFGAQGGRNVVWGEPEFCAELKRSADRFHAMTGQPIDP
LWRAPGGHLSAVTEGWAKQCGFAHVAWAPAGFLGDELPSERYPNAMLLDKALANLRDGDITMAHLGIWSRKDPWAPADLE
PLITGLERKGFCFATLRDHPQYQAWFAAHPPAR
>Mature_273_residues
MQSVLPMLRSVAAAVALGACAFAVAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRRHRIRATFFLANEQTIHGDST
LDDAWAPYWKSLAADGHAFGTHTFDHVYYKGEAGPDKVRFRPQFGAQGGRNVVWGEPEFCAELKRSADRFHAMTGQPIDP
LWRAPGGHLSAVTEGWAKQCGFAHVAWAPAGFLGDELPSERYPNAMLLDKALANLRDGDITMAHLGIWSRKDPWAPADLE
PLITGLERKGFCFATLRDHPQYQAWFAAHPPAR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29759; Mature: 29759

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVLPMLRSVAAAVALGACAFAVAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
HRIRATFFLANEQTIHGDSTLDDAWAPYWKSLAADGHAFGTHTFDHVYYKGEAGPDKVRF
HHEEEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEE
RPQFGAQGGRNVVWGEPEFCAELKRSADRFHAMTGQPIDPLWRAPGGHLSAVTEGWAKQC
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHC
GFAHVAWAPAGFLGDELPSERYPNAMLLDKALANLRDGDITMAHLGIWSRKDPWAPADLE
CCEEEECCCCCHHCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHH
PLITGLERKGFCFATLRDHPQYQAWFAAHPPAR
HHHHHHCCCCEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure
MQSVLPMLRSVAAAVALGACAFAVAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
HRIRATFFLANEQTIHGDSTLDDAWAPYWKSLAADGHAFGTHTFDHVYYKGEAGPDKVRF
HHEEEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEE
RPQFGAQGGRNVVWGEPEFCAELKRSADRFHAMTGQPIDPLWRAPGGHLSAVTEGWAKQC
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHC
GFAHVAWAPAGFLGDELPSERYPNAMLLDKALANLRDGDITMAHLGIWSRKDPWAPADLE
CCEEEECCCCCHHCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHH
PLITGLERKGFCFATLRDHPQYQAWFAAHPPAR
HHHHHHCCCCEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA