Click here to switch to the map view.

The map label for this gene is 17545971

Identifier: 17545971

GI number: 17545971

Start: 1331151

End: 1332143

Strand: Direct

Name: 17545971

Synonym: RSc1252

Alternate gene names: NA

Gene position: 1331151-1332143 (Clockwise)

Preceding gene: 17545970

Following gene: 17545972

Centisome position: 35.82

GC content: 66.06

Gene sequence:

>993_bases
ATGTCTGCCTCGCGCATTTCGTTTGTTTCCCGTTGGGTTTCGCTGCTGGCGCTCTCGGCCGGTGTGCTCGCGCCGCTTGC
CGCACATGCGGAAGTCGTGACCGTGCTCAATTCGGGAGACGCCAGCGTCACCCTGATCGACAAGGATTCACGCCGGGTGC
TGGAGACCTTCCCCATCGGCAAGGAGCCGCATCACCTGATCGCCACGCCGGACGAGAAGTCGCTGATCGTCGCCAACGCG
GTCGGCAACGAGCTGGTGTTCCTCGACCCGGTTACCGGCAAGATCCAGCAGCGCGTGCCGCGCATCGACGATCCGTACCA
GATCGGTTTCTCGCCCGACCAGAAATGGTTCCTGACCACCGGCAACCGCCTTGACCGCGTCGACATCTACCGCTGGGACG
GCCACGCGCTGACCATCGCCAAGCAGTTGCCGCTGGCCAAGACGCCCAGCCACATCGCCTTCACCGCCGACAGCAAGGTG
GCGTTCGTGACGCTGCAGGATTCCAACGAAGTGGTCGCCATCGACCTGCCCACGCAGACCGTGATGTGGCGCATGACCTC
CGGCGCCGCGCCCGCCGGCGTGTGGGTGACCACCGACCAGAAATACCTGCTGGTCGGCATGACCGGCGCGGATTTCGTCG
AGGTCATCGACTGGCGCAACCGCACCAGCGTCAAGCGCATCCCCACCGGCAAGGGCGCCCACAACTTCCGCGCGCTGGGC
GACAAGCGGCACCTGTTCCTGTCCAACCGCGTCTCGGGCACCATCAGCATCATCGACGAGCAGACGCTCACCAAGGTGGG
CGACATCACCGGCCTGCCGCCGGGCCCGGACGACATGGAGCTGACCGCCGACGGCAAGCAGCTGTGGGTGACCTGCCGCT
GGGCCAAGCGCGTGGCGATCGTCGACGTGGCCAGCCGCAAGGTGGTCGAAGAAATCAAGGTGGGGCGCTCGCCGCACGGC
ATCTATTTCCGCACGCGCGCGCCGCTGATCTGA

Upstream 100 bases:

>100_bases
AAAGTTCCCCCATTTCTTTGCTTTTCTTTTTGATTTTGCGTCATCGGTGCCGCGAGGCCAGCCGTTAAAATGGCGGGCTA
AGTTGCTGAATCTTCTCACT

Downstream 100 bases:

>100_bases
GGGGATGGCCATGCAGTCCGTTCTGCCGATGCTGCGCTCGGTGGCCGCCGCCGTGGCCCTCGGAGCCTGCGCGTTCGCCG
TGGCGGCGCCGGGCGGCGTC

Product: signal peptide protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Cell Surface Protein; Surface Layer Protein; Cytochrome D1 Heme Region; YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Signal Peptide; Surface Antigen; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Yvtn Beta-Propeller Repeat Family Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Surface Antigen-Like Protein; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; SGL Domain-Containing Protein; Secreted Protein; Lipoprotein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSASRISFVSRWVSLLALSAGVLAPLAAHAEVVTVLNSGDASVTLIDKDSRRVLETFPIGKEPHHLIATPDEKSLIVANA
VGNELVFLDPVTGKIQQRVPRIDDPYQIGFSPDQKWFLTTGNRLDRVDIYRWDGHALTIAKQLPLAKTPSHIAFTADSKV
AFVTLQDSNEVVAIDLPTQTVMWRMTSGAAPAGVWVTTDQKYLLVGMTGADFVEVIDWRNRTSVKRIPTGKGAHNFRALG
DKRHLFLSNRVSGTISIIDEQTLTKVGDITGLPPGPDDMELTADGKQLWVTCRWAKRVAIVDVASRKVVEEIKVGRSPHG
IYFRTRAPLI

Sequences:

>Translated_330_residues
MSASRISFVSRWVSLLALSAGVLAPLAAHAEVVTVLNSGDASVTLIDKDSRRVLETFPIGKEPHHLIATPDEKSLIVANA
VGNELVFLDPVTGKIQQRVPRIDDPYQIGFSPDQKWFLTTGNRLDRVDIYRWDGHALTIAKQLPLAKTPSHIAFTADSKV
AFVTLQDSNEVVAIDLPTQTVMWRMTSGAAPAGVWVTTDQKYLLVGMTGADFVEVIDWRNRTSVKRIPTGKGAHNFRALG
DKRHLFLSNRVSGTISIIDEQTLTKVGDITGLPPGPDDMELTADGKQLWVTCRWAKRVAIVDVASRKVVEEIKVGRSPHG
IYFRTRAPLI
>Mature_329_residues
SASRISFVSRWVSLLALSAGVLAPLAAHAEVVTVLNSGDASVTLIDKDSRRVLETFPIGKEPHHLIATPDEKSLIVANAV
GNELVFLDPVTGKIQQRVPRIDDPYQIGFSPDQKWFLTTGNRLDRVDIYRWDGHALTIAKQLPLAKTPSHIAFTADSKVA
FVTLQDSNEVVAIDLPTQTVMWRMTSGAAPAGVWVTTDQKYLLVGMTGADFVEVIDWRNRTSVKRIPTGKGAHNFRALGD
KRHLFLSNRVSGTISIIDEQTLTKVGDITGLPPGPDDMELTADGKQLWVTCRWAKRVAIVDVASRKVVEEIKVGRSPHGI
YFRTRAPLI

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36291; Mature: 36160

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASRISFVSRWVSLLALSAGVLAPLAAHAEVVTVLNSGDASVTLIDKDSRRVLETFPIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCHHHHHCCCC
KEPHHLIATPDEKSLIVANAVGNELVFLDPVTGKIQQRVPRIDDPYQIGFSPDQKWFLTT
CCCCEEEECCCCCCEEEEEECCCEEEEECCCCCHHHHHCCCCCCCEEECCCCCCCEEEEC
GNRLDRVDIYRWDGHALTIAKQLPLAKTPSHIAFTADSKVAFVTLQDSNEVVAIDLPTQT
CCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEECCCCE
VMWRMTSGAAPAGVWVTTDQKYLLVGMTGADFVEVIDWRNRTSVKRIPTGKGAHNFRALG
EEEEEECCCCCCCEEEECCCCEEEEEECCCCHHHHHCCCCCCCEEECCCCCCCCCHHCCC
DKRHLFLSNRVSGTISIIDEQTLTKVGDITGLPPGPDDMELTADGKQLWVTCRWAKRVAI
CCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEEEECCEEEE
VDVASRKVVEEIKVGRSPHGIYFRTRAPLI
EEHHHHHHHHHHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
SASRISFVSRWVSLLALSAGVLAPLAAHAEVVTVLNSGDASVTLIDKDSRRVLETFPIG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCHHHHHCCCC
KEPHHLIATPDEKSLIVANAVGNELVFLDPVTGKIQQRVPRIDDPYQIGFSPDQKWFLTT
CCCCEEEECCCCCCEEEEEECCCEEEEECCCCCHHHHHCCCCCCCEEECCCCCCCEEEEC
GNRLDRVDIYRWDGHALTIAKQLPLAKTPSHIAFTADSKVAFVTLQDSNEVVAIDLPTQT
CCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEECCCCE
VMWRMTSGAAPAGVWVTTDQKYLLVGMTGADFVEVIDWRNRTSVKRIPTGKGAHNFRALG
EEEEEECCCCCCCEEEECCCCEEEEEECCCCHHHHHCCCCCCCEEECCCCCCCCCHHCCC
DKRHLFLSNRVSGTISIIDEQTLTKVGDITGLPPGPDDMELTADGKQLWVTCRWAKRVAI
CCEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEEEECCEEEE
VDVASRKVVEEIKVGRSPHGIYFRTRAPLI
EEHHHHHHHHHHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA