| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is mocC [H]
Identifier: 17545966
GI number: 17545966
Start: 1322340
End: 1323281
Strand: Direct
Name: mocC [H]
Synonym: RSc1247
Alternate gene names: 17545966
Gene position: 1322340-1323281 (Clockwise)
Preceding gene: 17545965
Following gene: 17545967
Centisome position: 35.58
GC content: 67.62
Gene sequence:
>942_bases ATGGAATCCACCGATATGACGATGAAAATCGGCTGTGCGCCCTGCTGCTGGGGCGTGGACGACGTGAGGAATCCGCACCT GCCGCCCTGGCGCCGGGTGCTGTCCGAAGCGTCGCTGGCGGGCTACTCGGGCATCGAGCTCGGACCTTATGGCTATCTCC CGCTGGAGGCGGATGTCGTGCGGGCCGAACTGGATGCGCGGGGCCTGAGCATCACGGCCGGCACGATCTTCGACGACCTG GTGTCGCCGGAGAATCTGCCGAGCCTGCTGCGCCAGACGCGCGAGATCTGCGCGCTGATCCGGCAACTGCCGCCATTGCC GACCCAGGCCGGTCAGCGTTATCCCGCGCCGTACCTCGTGGTGATGGACTGGGGGCACCCGGAGCGTGATTACACGGCAG GCCACCCGGAGCGCGCGCCGCGGCTGTCCGATGCACAGTGGGCGGGCATGGTCGAACACATCCGGCAGATCGCGGAGGTG GCCCGCGGCGAGTTCGGCGTGCGCGCGGTCATCCACCCGCATGCCGGCGGCTATCTCGAATTCGACGACGAGATCGACCG GATCGTCGCCGATATCCCCGCCGAAACGGCCGGGCTGTGCCTCGATACGGGGCACCTCTATTACTCCGGCATGGACCCGG CGAGCTGGCTGCGCCGGCATGCCGCGCGCCTCGACTACGTGCATTTCAAGGACATCGATCTCCCGACGTACCGGCAGGTG CTGGGCGAACGGATCGCCTTCTTCGAGGCCTGCGCGCGCGGCGTGATGTGCCCGATCGGCCAGGGTGTGCTGGATTACCC GGCCATCAAGCGCACGCTGGAAGCACTGGGCTACGCCGGCTACATCACGATCGAGCAGGAGCGCGATCCGCGCAACGCCG GCTCCAGCCTGCGCGATGTGGCGGCGAGCCGTGAATTTCTCGCCACGGTGGGTTTTGCCTGA
Upstream 100 bases:
>100_bases CGCCTGCGTGCGGGCACAGAAGAGCGGCGCGATCGAGCGCATCGAGATGGCGGCGAGGCCGGCGTTCTATCGTGGCTGAG TCCGGCCGCGGCCACAACGA
Downstream 100 bases:
>100_bases ACGCCATTTCATCTGCAAACGAGGAGCGCAAACACCATGATCGACGGACAGATCCGGCTCGGCCATTCGATGCCCTGGGG CATGGTCGGTGGCGGGCAGG
Product: myo-inositol catabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MESTDMTMKIGCAPCCWGVDDVRNPHLPPWRRVLSEASLAGYSGIELGPYGYLPLEADVVRAELDARGLSITAGTIFDDL VSPENLPSLLRQTREICALIRQLPPLPTQAGQRYPAPYLVVMDWGHPERDYTAGHPERAPRLSDAQWAGMVEHIRQIAEV ARGEFGVRAVIHPHAGGYLEFDDEIDRIVADIPAETAGLCLDTGHLYYSGMDPASWLRRHAARLDYVHFKDIDLPTYRQV LGERIAFFEACARGVMCPIGQGVLDYPAIKRTLEALGYAGYITIEQERDPRNAGSSLRDVAASREFLATVGFA
Sequences:
>Translated_313_residues MESTDMTMKIGCAPCCWGVDDVRNPHLPPWRRVLSEASLAGYSGIELGPYGYLPLEADVVRAELDARGLSITAGTIFDDL VSPENLPSLLRQTREICALIRQLPPLPTQAGQRYPAPYLVVMDWGHPERDYTAGHPERAPRLSDAQWAGMVEHIRQIAEV ARGEFGVRAVIHPHAGGYLEFDDEIDRIVADIPAETAGLCLDTGHLYYSGMDPASWLRRHAARLDYVHFKDIDLPTYRQV LGERIAFFEACARGVMCPIGQGVLDYPAIKRTLEALGYAGYITIEQERDPRNAGSSLRDVAASREFLATVGFA >Mature_313_residues MESTDMTMKIGCAPCCWGVDDVRNPHLPPWRRVLSEASLAGYSGIELGPYGYLPLEADVVRAELDARGLSITAGTIFDDL VSPENLPSLLRQTREICALIRQLPPLPTQAGQRYPAPYLVVMDWGHPERDYTAGHPERAPRLSDAQWAGMVEHIRQIAEV ARGEFGVRAVIHPHAGGYLEFDDEIDRIVADIPAETAGLCLDTGHLYYSGMDPASWLRRHAARLDYVHFKDIDLPTYRQV LGERIAFFEACARGVMCPIGQGVLDYPAIKRTLEALGYAGYITIEQERDPRNAGSSLRDVAASREFLATVGFA
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 34650; Mature: 34650
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTDMTMKIGCAPCCWGVDDVRNPHLPPWRRVLSEASLAGYSGIELGPYGYLPLEADVV CCCCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHH RAELDARGLSITAGTIFDDLVSPENLPSLLRQTREICALIRQLPPLPTQAGQRYPAPYLV HHHHCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE VMDWGHPERDYTAGHPERAPRLSDAQWAGMVEHIRQIAEVARGEFGVRAVIHPHAGGYLE EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE FDDEIDRIVADIPAETAGLCLDTGHLYYSGMDPASWLRRHAARLDYVHFKDIDLPTYRQV EHHHHHHHHHHCCCCHHCEEEECCCEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHH LGERIAFFEACARGVMCPIGQGVLDYPAIKRTLEALGYAGYITIEQERDPRNAGSSLRDV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH AASREFLATVGFA HHHHHHHHHHCCC >Mature Secondary Structure MESTDMTMKIGCAPCCWGVDDVRNPHLPPWRRVLSEASLAGYSGIELGPYGYLPLEADVV CCCCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHH RAELDARGLSITAGTIFDDLVSPENLPSLLRQTREICALIRQLPPLPTQAGQRYPAPYLV HHHHCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE VMDWGHPERDYTAGHPERAPRLSDAQWAGMVEHIRQIAEVARGEFGVRAVIHPHAGGYLE EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE FDDEIDRIVADIPAETAGLCLDTGHLYYSGMDPASWLRRHAARLDYVHFKDIDLPTYRQV EHHHHHHHHHHCCCCHHCEEEECCCEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHH LGERIAFFEACARGVMCPIGQGVLDYPAIKRTLEALGYAGYITIEQERDPRNAGSSLRDV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH AASREFLATVGFA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]