Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is iolE [H]

Identifier: 17545957

GI number: 17545957

Start: 1310672

End: 1311601

Strand: Reverse

Name: iolE [H]

Synonym: RSc1238

Alternate gene names: 17545957

Gene position: 1311601-1310672 (Counterclockwise)

Preceding gene: 17545958

Following gene: 17545956

Centisome position: 35.29

GC content: 66.45

Gene sequence:

>930_bases
ATGACCTGGAACGTTCGTATCGGCATCAACCCGCTGTCGTGGATGAACGATGACCTGCCGTCGCTCGGCGGCGAAACGCC
GCTCGAGACCGCCCTGAAGGAAGGCGCGGAAATCGGCTATGCGGGCTTCGAGCTCGGCAACAAGTTTCCGAAGAGCGGCC
CCGAGCTGAAAGCGAAGTTGAACGAATACGGGCTGGTCTGCGTGTCGGGCTGGTACTCCGGCTTTCTCGCGGAGGTCGAG
CCCGGCAAGACCGATGCCGAGGCGGTCACCACCGAGATCGAGCGCGGCAAGGCTCACATGGCCAAGCTGCGGTACAACGA
CGTGAAGGTGGTCGTGTACGGCGAATGCGCCGGCACGATCCAGGGCCAGATCGACACGCCGGTCTCGAAGCGGCCCCGCT
TCCCCGACGCCGCCGCCTGGCAGCGCTACGCGCAACGCCTGAACGCGTTCGGCGCGTATCTGCTCGAGACCTACGGGATC
AAGCTCGCCTACCACCATCACATGGGCGCGTACGTCGAATCCCCCGGCGACGTGGACCGCCTGATGTCGCTGACCGACCC
GCAGAAGGTCTTCCTGCTGCTCGACACCGGCCACGCATACTTCGGCGGCGCGGCCGACCCCGTCGCACTGCTCAAGCGGC
ACGTGTCGCGCGTCGCGCACGTCCATTGCAAGGACGTCCGCCCGCAGTTGATCGCCCAGGCCCGCAACGACAGCTGGAGC
TTCCTGAACGGCGTGATCAACGGCACCTTCACCGTGCCGGGCGACGGCGCACTCGACTACGAGGCCACGCTGCGCACACT
CAAGGACGCCGGCTACGAAGGCTGGCTCGTCGTCGAAGCCGAGCAGGACCCGGCTGTCGCGCCGAGCTATCAATACGCGA
AGAAGGGCTACGAAACGCTGCGCGCGCTGGTCGACCGGCTGGGCGCCTGA

Upstream 100 bases:

>100_bases
ACCTCGAAGCCAAGACACGGCAGCGGCACTGACCTGCCTGGCGCGGGCAGCCGCAGCGGCCCACGCCGATTCCCCCCATC
ATCACCCGAGGAAGATTCAT

Downstream 100 bases:

>100_bases
CCTGCGCCGCCACCGCTTTGCGAAAGGAGCTTTCCATGACGATCTCTCCATTGCTGGTCAAGGCGTTGCCGAAGCGCGAG
ATATGCAATGTCACGCCGGA

Product: myo-inositol catabolism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTWNVRIGINPLSWMNDDLPSLGGETPLETALKEGAEIGYAGFELGNKFPKSGPELKAKLNEYGLVCVSGWYSGFLAEVE
PGKTDAEAVTTEIERGKAHMAKLRYNDVKVVVYGECAGTIQGQIDTPVSKRPRFPDAAAWQRYAQRLNAFGAYLLETYGI
KLAYHHHMGAYVESPGDVDRLMSLTDPQKVFLLLDTGHAYFGGAADPVALLKRHVSRVAHVHCKDVRPQLIAQARNDSWS
FLNGVINGTFTVPGDGALDYEATLRTLKDAGYEGWLVVEAEQDPAVAPSYQYAKKGYETLRALVDRLGA

Sequences:

>Translated_309_residues
MTWNVRIGINPLSWMNDDLPSLGGETPLETALKEGAEIGYAGFELGNKFPKSGPELKAKLNEYGLVCVSGWYSGFLAEVE
PGKTDAEAVTTEIERGKAHMAKLRYNDVKVVVYGECAGTIQGQIDTPVSKRPRFPDAAAWQRYAQRLNAFGAYLLETYGI
KLAYHHHMGAYVESPGDVDRLMSLTDPQKVFLLLDTGHAYFGGAADPVALLKRHVSRVAHVHCKDVRPQLIAQARNDSWS
FLNGVINGTFTVPGDGALDYEATLRTLKDAGYEGWLVVEAEQDPAVAPSYQYAKKGYETLRALVDRLGA
>Mature_308_residues
TWNVRIGINPLSWMNDDLPSLGGETPLETALKEGAEIGYAGFELGNKFPKSGPELKAKLNEYGLVCVSGWYSGFLAEVEP
GKTDAEAVTTEIERGKAHMAKLRYNDVKVVVYGECAGTIQGQIDTPVSKRPRFPDAAAWQRYAQRLNAFGAYLLETYGIK
LAYHHHMGAYVESPGDVDRLMSLTDPQKVFLLLDTGHAYFGGAADPVALLKRHVSRVAHVHCKDVRPQLIAQARNDSWSF
LNGVINGTFTVPGDGALDYEATLRTLKDAGYEGWLVVEAEQDPAVAPSYQYAKKGYETLRALVDRLGA

Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iolE/mocC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 33911; Mature: 33780

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWNVRIGINPLSWMNDDLPSLGGETPLETALKEGAEIGYAGFELGNKFPKSGPELKAKL
CEEEEEECCCHHHHCCCCHHHCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHH
NEYGLVCVSGWYSGFLAEVEPGKTDAEAVTTEIERGKAHMAKLRYNDVKVVVYGECAGTI
HHCCEEEEECCHHCEEEECCCCCCCHHHHHHHHHHCHHHHHHEEECCEEEEEEECCCCEE
QGQIDTPVSKRPRFPDAAAWQRYAQRLNAFGAYLLETYGIKLAYHHHMGAYVESPGDVDR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEECCCCCHHH
LMSLTDPQKVFLLLDTGHAYFGGAADPVALLKRHVSRVAHVHCKDVRPQLIAQARNDSWS
HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHH
FLNGVINGTFTVPGDGALDYEATLRTLKDAGYEGWLVVEAEQDPAVAPSYQYAKKGYETL
HHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH
RALVDRLGA
HHHHHHHCC
>Mature Secondary Structure 
TWNVRIGINPLSWMNDDLPSLGGETPLETALKEGAEIGYAGFELGNKFPKSGPELKAKL
EEEEEECCCHHHHCCCCHHHCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHH
NEYGLVCVSGWYSGFLAEVEPGKTDAEAVTTEIERGKAHMAKLRYNDVKVVVYGECAGTI
HHCCEEEEECCHHCEEEECCCCCCCHHHHHHHHHHCHHHHHHEEECCEEEEEEECCCCEE
QGQIDTPVSKRPRFPDAAAWQRYAQRLNAFGAYLLETYGIKLAYHHHMGAYVESPGDVDR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEECCCCCHHH
LMSLTDPQKVFLLLDTGHAYFGGAADPVALLKRHVSRVAHVHCKDVRPQLIAQARNDSWS
HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHH
FLNGVINGTFTVPGDGALDYEATLRTLKDAGYEGWLVVEAEQDPAVAPSYQYAKKGYETL
HHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH
RALVDRLGA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]