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The map label for this gene is omp32 [H]

Identifier: 17545955

GI number: 17545955

Start: 1308526

End: 1309635

Strand: Reverse

Name: omp32 [H]

Synonym: RSc1236

Alternate gene names: 17545955

Gene position: 1309635-1308526 (Counterclockwise)

Preceding gene: 17545956

Following gene: 17545954

Centisome position: 35.24

GC content: 64.5

Gene sequence:

>1110_bases
ATGAGCATCAAGGCTAGAACATCGCGCCGGCAATGCAGTGCCCAGCGCGTATCGGTACGCTTCACCGCGGCTTCGGCGCT
TGCCGTCGCTTGCGGTCTTGCCAGCGCCCAAAGCGGCGTCACGCTGTATGGACGCGTTGCCGGAGGGATCGACTATACGA
ACAAGATCGACACCGGCAGCAGCCAATCCGCCGGCAGACTGCAGTACGGCAGCAATCAATGGGGCACCAGCATGTGGGGC
CTGCGTGCCAGCGAAGACCTCGGGGGCGGCCTGAAGGCGGTGATGAACCTCGAAAACGGCTTCACTTCCGCCGATGGCGT
CGCCTCCGGCGGCCTCTTCAACCGCTACGCCGTGGCGGGGCTGTCCAGCAGCACGTACGGGACGCTGCTGGTCGGCCGCG
CCATGGGCATTCCCGACAGCGAGGTCTACACGATCGATCCCATGGGGCTGCAATTCATGAGCGCCGCGACCTTCCAGGGC
AATCGGACGTGGGGGTCGCGCACCAAGGCGATCACCTACAACTCGCCGGTCTGGGGCGGCTGGTCATTCCGCGCCCAAGC
CGGGCTGAACGGCACGGCCGGCAACTTCAACGCAGGCAGGCAGCTTGCAGCCAGCATCGGTTACCAGAACGGCCCGCTCA
TGCTCAAAGGATTCTACGAAGACATCCGTGACAGCGCGGGGCAATTCACCAATCTCTACACGGCATCCCGCCTATATACC
GCGGGCGGGACCTATCAAATCGGCGATGCCAAGCTGTTCGGCGGATACAGCCAGATCCAGTCCAGCGGCAACACGATCGC
GGATGCCGACAACCCGACCGGCGCGACGCGGCAGCAGACCTACTGGATCGGGACCAACTACCAGATGACACCGGCGGCGA
CGCTGGTCGGCGGCGTCTACAGGACCCACCGGAACCACGGCGGCGGCACCGGTACGCTGCTGACGTTGGGCGTCAACTAC
GCGTTGTCGAAACGCACGTTGCTGTATGGCACCGTTGGAACCGTCCTCAACGGCAAGCAATCGACGTTCTCGGTGGAGGC
CAACGGCGGCAAACCCGCAGCGGGCGCCAGCCAGCAAGGGGTCTACACCGGCATCGTGCACGTGTTCTGA

Upstream 100 bases:

>100_bases
CGCGATCTGCCATCGCATCCGAGCGCACAAAAAAATAGGCGATAGCTCATCGCCACCGTAGCGCAGGCGGCTTACCTGCC
AGATCGAGGAGACAGACGTC

Downstream 100 bases:

>100_bases
TTCGCACCGACGCAGGGTCGCGTCTCGCGCTGTAAAAGCCGGTGGCGGCATGGCTGCCATCGGCGCACATGCCGGAAATT
GCGCAGCCGACGCCACTGGC

Product: outer membrane porin lipoprotein transmembrane

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSIKARTSRRQCSAQRVSVRFTAASALAVACGLASAQSGVTLYGRVAGGIDYTNKIDTGSSQSAGRLQYGSNQWGTSMWG
LRASEDLGGGLKAVMNLENGFTSADGVASGGLFNRYAVAGLSSSTYGTLLVGRAMGIPDSEVYTIDPMGLQFMSAATFQG
NRTWGSRTKAITYNSPVWGGWSFRAQAGLNGTAGNFNAGRQLAASIGYQNGPLMLKGFYEDIRDSAGQFTNLYTASRLYT
AGGTYQIGDAKLFGGYSQIQSSGNTIADADNPTGATRQQTYWIGTNYQMTPAATLVGGVYRTHRNHGGGTGTLLTLGVNY
ALSKRTLLYGTVGTVLNGKQSTFSVEANGGKPAAGASQQGVYTGIVHVF

Sequences:

>Translated_369_residues
MSIKARTSRRQCSAQRVSVRFTAASALAVACGLASAQSGVTLYGRVAGGIDYTNKIDTGSSQSAGRLQYGSNQWGTSMWG
LRASEDLGGGLKAVMNLENGFTSADGVASGGLFNRYAVAGLSSSTYGTLLVGRAMGIPDSEVYTIDPMGLQFMSAATFQG
NRTWGSRTKAITYNSPVWGGWSFRAQAGLNGTAGNFNAGRQLAASIGYQNGPLMLKGFYEDIRDSAGQFTNLYTASRLYT
AGGTYQIGDAKLFGGYSQIQSSGNTIADADNPTGATRQQTYWIGTNYQMTPAATLVGGVYRTHRNHGGGTGTLLTLGVNY
ALSKRTLLYGTVGTVLNGKQSTFSVEANGGKPAAGASQQGVYTGIVHVF
>Mature_368_residues
SIKARTSRRQCSAQRVSVRFTAASALAVACGLASAQSGVTLYGRVAGGIDYTNKIDTGSSQSAGRLQYGSNQWGTSMWGL
RASEDLGGGLKAVMNLENGFTSADGVASGGLFNRYAVAGLSSSTYGTLLVGRAMGIPDSEVYTIDPMGLQFMSAATFQGN
RTWGSRTKAITYNSPVWGGWSFRAQAGLNGTAGNFNAGRQLAASIGYQNGPLMLKGFYEDIRDSAGQFTNLYTASRLYTA
GGTYQIGDAKLFGGYSQIQSSGNTIADADNPTGATRQQTYWIGTNYQMTPAATLVGGVYRTHRNHGGGTGTLLTLGVNYA
LSKRTLLYGTVGTVLNGKQSTFSVEANGGKPAAGASQQGVYTGIVHVF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38597; Mature: 38466

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKARTSRRQCSAQRVSVRFTAASALAVACGLASAQSGVTLYGRVAGGIDYTNKIDTGS
CCCCCCCHHHHHCCEEEEEEEEHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCC
SQSAGRLQYGSNQWGTSMWGLRASEDLGGGLKAVMNLENGFTSADGVASGGLFNRYAVAG
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEC
LSSSTYGTLLVGRAMGIPDSEVYTIDPMGLQFMSAATFQGNRTWGSRTKAITYNSPVWGG
CCCCCCEEEEEEEECCCCCCCEEEECCCCCEEHEEEEECCCCCCCCCEEEEEECCCCCCC
WSFRAQAGLNGTAGNFNAGRQLAASIGYQNGPLMLKGFYEDIRDSAGQFTNLYTASRLYT
EEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCHHEEEEEEEEEE
AGGTYQIGDAKLFGGYSQIQSSGNTIADADNPTGATRQQTYWIGTNYQMTPAATLVGGVY
CCCEEEECCEEEECCHHHHHCCCCEEECCCCCCCCCCCEEEEECCCEEECHHHHHHHHHH
RTHRNHGGGTGTLLTLGVNYALSKRTLLYGTVGTVLNGKQSTFSVEANGGKPAAGASQQG
HHHCCCCCCCEEEEEEECCEEECCCEEEEEEHHHHCCCCCCEEEEECCCCCCCCCCCCCC
VYTGIVHVF
EEEEEEEEC
>Mature Secondary Structure 
SIKARTSRRQCSAQRVSVRFTAASALAVACGLASAQSGVTLYGRVAGGIDYTNKIDTGS
CCCCCCHHHHHCCEEEEEEEEHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCC
SQSAGRLQYGSNQWGTSMWGLRASEDLGGGLKAVMNLENGFTSADGVASGGLFNRYAVAG
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEC
LSSSTYGTLLVGRAMGIPDSEVYTIDPMGLQFMSAATFQGNRTWGSRTKAITYNSPVWGG
CCCCCCEEEEEEEECCCCCCCEEEECCCCCEEHEEEEECCCCCCCCCEEEEEECCCCCCC
WSFRAQAGLNGTAGNFNAGRQLAASIGYQNGPLMLKGFYEDIRDSAGQFTNLYTASRLYT
EEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCHHEEEEEEEEEE
AGGTYQIGDAKLFGGYSQIQSSGNTIADADNPTGATRQQTYWIGTNYQMTPAATLVGGVY
CCCEEEECCEEEECCHHHHHCCCCEEECCCCCCCCCCCEEEEECCCEEECHHHHHHHHHH
RTHRNHGGGTGTLLTLGVNYALSKRTLLYGTVGTVLNGKQSTFSVEANGGKPAAGASQQG
HHHCCCCCCCEEEEEEECCEEECCCEEEEEEHHHHCCCCCCEEEEECCCCCCCCCCCCCC
VYTGIVHVF
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]