| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is surE [H]
Identifier: 17545923
GI number: 17545923
Start: 1272903
End: 1273658
Strand: Direct
Name: surE [H]
Synonym: RSc1204
Alternate gene names: 17545923
Gene position: 1272903-1273658 (Clockwise)
Preceding gene: 17545921
Following gene: 17545924
Centisome position: 34.25
GC content: 68.25
Gene sequence:
>756_bases ATGCATATTCTTCTCGCCAACGACGACGGTTATCTCGCGCCCGGCCTCGCGGCACTCCACCGGGCGCTCGCGCCGCTGGG GCGCATCACGGTGGTGGCGCCGGAGCAGAACCACAGCGGCGCCTCCAACTCGCTCACGCTGCAGCGTCCGCTGTCCGTGT TCCAGGCGACCGAGGGTGCCCAGAAGGGCTTCCGCTTCGTCAATGGCACGCCGACCGACTGCGTGCACATCGCGCTCACC GGCATGATCGAGGAGCGGCCCGATCTCGTTGTCTCCGGCATCAACCAGGGGCAGAACATGGGGGAAGACGTGCTGTATTC CGGCACCGTCGCCGCCGCCATCGAGGGCTACCTGTTCGGCGTCCCGTCGATCGCCTTCTCGCAGGTCGACAAGGGCTGGA CCCACCTGGATGCCGCCGAGCGCATCGCGCGCGAAGTCGTGGAGCGCTATCTGTCCGATCCGCCGGCCGGGCCCGTGCTG CTCAACGTCAATATCCCGAACCTGCCTTATGCCGAAGTGGCGGGCTGGCGCGCGACGCGGCTGGGCAAGCGGCACCAGTC GCAGCCGGTGATCCGCCAGGAGAATCCGCGCGGCGAACCGATCTACTGGGTGGGCGCCGCCGGCGATGCCAAGGATGCCA GCGAAGGTACCGACTTCCACGCGGTGGCGCACGGCTTCGTCTCGCTGACGCCGTTGCAGCTCGACCTGACCGACACGGCG CAACTGCGCTCCGTGCGTCGCTGGCAGACGCCATGA
Upstream 100 bases:
>100_bases TTCCGCGCAGGCGCGGCTGTCTTGCCGATGCATTTGCATGGCGCCTGTCGGCGTTCGCGCAAGCGCGAATACGTGACCGT GCTCGGTTACAATCCGCGCC
Downstream 100 bases:
>100_bases CCGCATCGGTGGCGCATGTCTGAACGCTCACGCGGCCGACGCTTTCCGCTGACGCTCGACGCGGTGGTCGAGCGCAAGCC GGCCGAGCGCCAGCGCGAGA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MHILLANDDGYLAPGLAALHRALAPLGRITVVAPEQNHSGASNSLTLQRPLSVFQATEGAQKGFRFVNGTPTDCVHIALT GMIEERPDLVVSGINQGQNMGEDVLYSGTVAAAIEGYLFGVPSIAFSQVDKGWTHLDAAERIAREVVERYLSDPPAGPVL LNVNIPNLPYAEVAGWRATRLGKRHQSQPVIRQENPRGEPIYWVGAAGDAKDASEGTDFHAVAHGFVSLTPLQLDLTDTA QLRSVRRWQTP
Sequences:
>Translated_251_residues MHILLANDDGYLAPGLAALHRALAPLGRITVVAPEQNHSGASNSLTLQRPLSVFQATEGAQKGFRFVNGTPTDCVHIALT GMIEERPDLVVSGINQGQNMGEDVLYSGTVAAAIEGYLFGVPSIAFSQVDKGWTHLDAAERIAREVVERYLSDPPAGPVL LNVNIPNLPYAEVAGWRATRLGKRHQSQPVIRQENPRGEPIYWVGAAGDAKDASEGTDFHAVAHGFVSLTPLQLDLTDTA QLRSVRRWQTP >Mature_251_residues MHILLANDDGYLAPGLAALHRALAPLGRITVVAPEQNHSGASNSLTLQRPLSVFQATEGAQKGFRFVNGTPTDCVHIALT GMIEERPDLVVSGINQGQNMGEDVLYSGTVAAAIEGYLFGVPSIAFSQVDKGWTHLDAAERIAREVVERYLSDPPAGPVL LNVNIPNLPYAEVAGWRATRLGKRHQSQPVIRQENPRGEPIYWVGAAGDAKDASEGTDFHAVAHGFVSLTPLQLDLTDTA QLRSVRRWQTP
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=248, Percent_Identity=45.5645161290323, Blast_Score=216, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27087; Mature: 27087
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHILLANDDGYLAPGLAALHRALAPLGRITVVAPEQNHSGASNSLTLQRPLSVFQATEGA CEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHCCH QKGFRFVNGTPTDCVHIALTGMIEERPDLVVSGINQGQNMGEDVLYSGTVAAAIEGYLFG HHCCEECCCCCCCEEEHEEHHHHHCCCCEEEECCCCCCCCCCHHEECCHHHHHHHHHHCC VPSIAFSQVDKGWTHLDAAERIAREVVERYLSDPPAGPVLLNVNIPNLPYAEVAGWRATR CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHH LGKRHQSQPVIRQENPRGEPIYWVGAAGDAKDASEGTDFHAVAHGFVSLTPLQLDLTDTA HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHEEECEEEEECCCHH QLRSVRRWQTP HHHHHHHCCCC >Mature Secondary Structure MHILLANDDGYLAPGLAALHRALAPLGRITVVAPEQNHSGASNSLTLQRPLSVFQATEGA CEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHCCH QKGFRFVNGTPTDCVHIALTGMIEERPDLVVSGINQGQNMGEDVLYSGTVAAAIEGYLFG HHCCEECCCCCCCEEEHEEHHHHHCCCCEEEECCCCCCCCCCHHEECCHHHHHHHHHHCC VPSIAFSQVDKGWTHLDAAERIAREVVERYLSDPPAGPVLLNVNIPNLPYAEVAGWRATR CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHH LGKRHQSQPVIRQENPRGEPIYWVGAAGDAKDASEGTDFHAVAHGFVSLTPLQLDLTDTA HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHEEECEEEEECCCHH QLRSVRRWQTP HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA