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The map label for this gene is recR

Identifier: 17545913

GI number: 17545913

Start: 1262514

End: 1263137

Strand: Direct

Name: recR

Synonym: RSc1194

Alternate gene names: 17545913

Gene position: 1262514-1263137 (Clockwise)

Preceding gene: 17545912

Following gene: 17545915

Centisome position: 33.97

GC content: 69.71

Gene sequence:

>624_bases
ATGATGCGCGGCGGTCCGGGCACGCCATCGGCGCTGCAGATGCTGATCGAGGCCTTGCGCGTGCTGCCGGGCGTGGGGCC
GAAGTCTGCGCAGCGCATGGCCTATCACCTGCTGCAGCATGACCGCGAAGGCGCGTCGCGGCTGGCCGAAGCGCTGGCCG
AAGCGGCCGAGTCGATCCACCATTGCAGCCGCTGCAACACCTTCACCGAGCAGGATGTCTGCGAGACCTGCCTGGACCCG
CGCCGCGACGCCTCGGTGCTGTGCGTGGTGGAAACGCCCGCCGACCAGATGATGATCGAGCAGACGCTGACCTACCGCGG
CCAGTATTTCGTGCTGATGGGGCGGCTCTCGCCGCTGGACAACATCGGCCCCAAGGAAATCCACCTCGAGCGCCTGCTGG
CCCGGGCGACCGATCCGGCGCTGGGCGGGCCGTGCGCCGAAGTCATTCTCGCCACCAACTTCACCAGCGAGGGCGAGGCC
ACCGCGCACTACATCGGCGAGATGCTCAAGGCGCGCGGCATCAAGGTGTCGCGGCTGGCGCGCGGTGTGCCGGTGGGCGG
CGAGCTGGAATACGTGGACGCGGGCACCATCGCCCGCGCGGTGCTGGACCGGCGCCAGCTCTGA

Upstream 100 bases:

>100_bases
GGACAGGAACACGCGCCATGGTGCCGGAATCCGCGCTGCCGTATCACTTCCGCGATCCGATGCCGGACGTCCCGCATCGC
ACGCGCGTGCTGGAGCGCGC

Downstream 100 bases:

>100_bases
AGCCCGGCCCGGCGCCTTCGCGTCAGAAATCCGCGTGAACCCGCAGGCCCACGATGGACACCGGGCCCCGATCCCGGTTG
TAGGCGGGGTGCACCACATA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MMRGGPGTPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNTFTEQDVCETCLDP
RRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEIHLERLLARATDPALGGPCAEVILATNFTSEGEA
TAHYIGEMLKARGIKVSRLARGVPVGGELEYVDAGTIARAVLDRRQL

Sequences:

>Translated_207_residues
MMRGGPGTPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNTFTEQDVCETCLDP
RRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEIHLERLLARATDPALGGPCAEVILATNFTSEGEA
TAHYIGEMLKARGIKVSRLARGVPVGGELEYVDAGTIARAVLDRRQL
>Mature_207_residues
MMRGGPGTPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIHHCSRCNTFTEQDVCETCLDP
RRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLDNIGPKEIHLERLLARATDPALGGPCAEVILATNFTSEGEA
TAHYIGEMLKARGIKVSRLARGVPVGGELEYVDAGTIARAVLDRRQL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=201, Percent_Identity=55.2238805970149, Blast_Score=210, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_RALSO (Q8Y050)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519315.1
- ProteinModelPortal:   Q8Y050
- SMR:   Q8Y050
- GeneID:   1220016
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1194
- NMPDR:   fig|267608.1.peg.1194
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   RSOL267608:RSC1194-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22510; Mature: 22510

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGGPGTPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIH
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
HCSRCNTFTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLD
HHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCC
NIGPKEIHLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
RGVPVGGELEYVDAGTIARAVLDRRQL
CCCCCCCCEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRGGPGTPSALQMLIEALRVLPGVGPKSAQRMAYHLLQHDREGASRLAEALAEAAESIH
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
HCSRCNTFTEQDVCETCLDPRRDASVLCVVETPADQMMIEQTLTYRGQYFVLMGRLSPLD
HHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCC
NIGPKEIHLERLLARATDPALGGPCAEVILATNFTSEGEATAHYIGEMLKARGIKVSRLA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
RGVPVGGELEYVDAGTIARAVLDRRQL
CCCCCCCCEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852