Click here to switch to the map view.

The map label for this gene is 17545902

Identifier: 17545902

GI number: 17545902

Start: 1246296

End: 1246859

Strand: Reverse

Name: 17545902

Synonym: RSc1183

Alternate gene names: NA

Gene position: 1246859-1246296 (Counterclockwise)

Preceding gene: 17545903

Following gene: 17545901

Centisome position: 33.55

GC content: 71.28

Gene sequence:

>564_bases
ATGACGATGCGCCCCACCTGTTCCTGTCGCCTTGCCGCACTGGCGCTGTCCGCGGCCGCGGCGGCCGCGCATGCGCAGTT
GCCCGCCCCGCTGGTCCTGAGCCTCACCGCGCAACTCGACGGCCAATCGGAGACCCGGCGGCTGACGCTGCCGGCGCAAG
CGTCCGCCACCGAACCGCACGTCACGCTGCTGGAGCGCACCCAGAGCTACGACACCGGCGGCAGCATGCCGCGCGCCGAA
TGGGAACAGCGCTTCGCCGCCGGGCTGCCCGACGACACGATTCCGCTCGGCTGCGACGCCTCGGCCTGCCGGTTCGTGCG
CCACCAGTGGGCCAAGACCGGCGTCGACGTCACGCTGCGTCCGCTGGCCGGATCGGGCGAATTTCAGCCGTTGTCGATCG
CCGTGACGCTGCACCGCTTCCTGCCCGCCCCCGATGGCGAGACGCCGGCCAGCATCGACACCTGGCGGCGCAATCTCGAC
ACCTCGTTGCGCGTGGGCGACAGCCGGACCATCGACCTGGATGCGCGCGGCACATTGACCATCGAGCGCCTGGATGCTCC
ATGA

Upstream 100 bases:

>100_bases
ACACGCTGCCGGCGCTCTACGCGCTCCTGCAAGCGTTCTATCTGCAAGACCCGGCACGGCGCATGCTGGACGCCGGGCGA
CACGCCGAGCCAGCCACGCC

Downstream 100 bases:

>100_bases
GGCCCGCAGCCCATGAAAGTGCATCAAGCATCGCTTTTTCTGCAGGGCCGCCTGGAAGCGGCCGCGCAAGCGCGTTGCCC
AAGCCCTTGTTTCTCTGGCA

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTMRPTCSCRLAALALSAAAAAAHAQLPAPLVLSLTAQLDGQSETRRLTLPAQASATEPHVTLLERTQSYDTGGSMPRAE
WEQRFAAGLPDDTIPLGCDASACRFVRHQWAKTGVDVTLRPLAGSGEFQPLSIAVTLHRFLPAPDGETPASIDTWRRNLD
TSLRVGDSRTIDLDARGTLTIERLDAP

Sequences:

>Translated_187_residues
MTMRPTCSCRLAALALSAAAAAAHAQLPAPLVLSLTAQLDGQSETRRLTLPAQASATEPHVTLLERTQSYDTGGSMPRAE
WEQRFAAGLPDDTIPLGCDASACRFVRHQWAKTGVDVTLRPLAGSGEFQPLSIAVTLHRFLPAPDGETPASIDTWRRNLD
TSLRVGDSRTIDLDARGTLTIERLDAP
>Mature_186_residues
TMRPTCSCRLAALALSAAAAAAHAQLPAPLVLSLTAQLDGQSETRRLTLPAQASATEPHVTLLERTQSYDTGGSMPRAEW
EQRFAAGLPDDTIPLGCDASACRFVRHQWAKTGVDVTLRPLAGSGEFQPLSIAVTLHRFLPAPDGETPASIDTWRRNLDT
SLRVGDSRTIDLDARGTLTIERLDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20070; Mature: 19939

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMRPTCSCRLAALALSAAAAAAHAQLPAPLVLSLTAQLDGQSETRRLTLPAQASATEPH
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCH
VTLLERTQSYDTGGSMPRAEWEQRFAAGLPDDTIPLGCDASACRFVRHQWAKTGVDVTLR
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
PLAGSGEFQPLSIAVTLHRFLPAPDGETPASIDTWRRNLDTSLRVGDSRTIDLDARGTLT
ECCCCCCCCEEEEEEEEEHHCCCCCCCCCCCHHHHHHCCCCEEEECCCEEEEECCCCEEE
IERLDAP
EEECCCC
>Mature Secondary Structure 
TMRPTCSCRLAALALSAAAAAAHAQLPAPLVLSLTAQLDGQSETRRLTLPAQASATEPH
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCH
VTLLERTQSYDTGGSMPRAEWEQRFAAGLPDDTIPLGCDASACRFVRHQWAKTGVDVTLR
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
PLAGSGEFQPLSIAVTLHRFLPAPDGETPASIDTWRRNLDTSLRVGDSRTIDLDARGTLT
ECCCCCCCCEEEEEEEEEHHCCCCCCCCCCCHHHHHHCCCCEEEECCCEEEEECCCCEEE
IERLDAP
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA