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The map label for this gene is rpmE2

Identifier: 17545901

GI number: 17545901

Start: 1245840

End: 1246103

Strand: Reverse

Name: rpmE2

Synonym: RSc1182

Alternate gene names: 17545901

Gene position: 1246103-1245840 (Counterclockwise)

Preceding gene: 17545902

Following gene: 17545900

Centisome position: 33.53

GC content: 55.68

Gene sequence:

>264_bases
ATGAAAGAAAATACCCACCCGAATTACCGCGAAGTCGTGTTCCAGGACATGTCCAGCGACTTCAGCTTCGTGACCCGCTC
GACCATCCAGACCAAGGAAAGCATCGTCTGGAAGGACGGTAAGGAATATCCGCTGGCCAAGATCGAAGTCTCGTCCGAAT
CGCACCCGTTCTACACGGGCACGCAAAAAATCATGGACACGGCCGGCCGCGTCGAGAAGTTCCGCCAGAAGTTCGGCAGC
AAGGCAGGCAAGGCTGCCAAGTAA

Upstream 100 bases:

>100_bases
CTCTGGCATAATCGCCGTTTCTCCACCCGGCAAGTGATTCGACGGCAGCGCGCTGCGCCCCTCGTCCCTCGAATTGGCTA
CCTCAAATCCAGGGCCCATC

Downstream 100 bases:

>100_bases
AGCCGGCTTCGGAGACGGTTCACGACATGATCCGTCCCGCTGGTCAAAGAAGAAGGCAGCTGCGGCTGCCTTTTTTGTTT
CTTGGCACAATGGCGGACTT

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKENTHPNYREVVFQDMSSDFSFVTRSTIQTKESIVWKDGKEYPLAKIEVSSESHPFYTGTQKIMDTAGRVEKFRQKFGS
KAGKAAK

Sequences:

>Translated_87_residues
MKENTHPNYREVVFQDMSSDFSFVTRSTIQTKESIVWKDGKEYPLAKIEVSSESHPFYTGTQKIMDTAGRVEKFRQKFGS
KAGKAAK
>Mature_87_residues
MKENTHPNYREVVFQDMSSDFSFVTRSTIQTKESIVWKDGKEYPLAKIEVSSESHPFYTGTQKIMDTAGRVEKFRQKFGS
KAGKAAK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=50.6329113924051, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_RALSO (Q8Y062)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_519303.1
- ProteinModelPortal:   Q8Y062
- SMR:   Q8Y062
- GeneID:   1220004
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1182
- NMPDR:   fig|267608.1.peg.1182
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- ProtClustDB:   PRK01678
- BioCyc:   RSOL267608:RSC1182-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9968; Mature: 9968

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENTHPNYREVVFQDMSSDFSFVTRSTIQTKESIVWKDGKEYPLAKIEVSSESHPFYTG
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCC
TQKIMDTAGRVEKFRQKFGSKAGKAAK
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKENTHPNYREVVFQDMSSDFSFVTRSTIQTKESIVWKDGKEYPLAKIEVSSESHPFYTG
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCC
TQKIMDTAGRVEKFRQKFGSKAGKAAK
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852