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The map label for this gene is yfjP [H]

Identifier: 17545887

GI number: 17545887

Start: 1225997

End: 1226872

Strand: Direct

Name: yfjP [H]

Synonym: RSc1168

Alternate gene names: 17545887

Gene position: 1225997-1226872 (Clockwise)

Preceding gene: 17545886

Following gene: 17545888

Centisome position: 32.99

GC content: 69.52

Gene sequence:

>876_bases
ATGGAGACGCGCATGAACGCGGTGGCCAAGAAAGCCGGTGTGGCGCGCGCTGCGACCGTCCGCAAGGCGGCGCCGGCCAA
GGCGCCCGCCGCCAAGAAAGCGGCGGCCAAGCGCGTCGACGGCGTGGCGAGCAAGACAGTCGCCGCCAAGGGGGCGGTGA
TCCAGGCGGCCAAGCGCGCCGCCGGCTCCAGGGTGCCGCTGCCCGAGGTGCCGGCCACCAGCGAGCCGCTGCCCGTCCCG
GCGGACGCGGTCACGCTGTCCGGCCCGCCGGCCTATTGGCAGGAGGCCTGCGCGGACCTCATGAAGCGCGACCGCATCCT
GCGCAAGATCATCCCGGCGTTCGGTCCGGCGCACCTGGCGTCGCGGGGCGATCCGTTCGTCACGCTGGCGCGCTCGATCG
TCGGCCAGCAGATTTCCGTCAAGGCGGCGCAATCCGTGTGGGAGCGCCTGGTCGAGGCATGCCCCAAACTGGTGCCCGCG
CAGTTCCTGCGCGCCGGCCATGAGAAGCTGGCGGGCTGCGGGCTGTCCAAGCGCAAGGCCGAGTACATCCTCGATCTCGC
CGAGCATTTCCGCAACGGCATGGTGCACGTTGCCAAGTGGGCGGAGATGGAAGACGAGGATGTGATCGCCGAGCTCACCC
AGATCCGCGGCATCGGCCGCTGGACGGCGGAGATGTTCCTGATGTTCAACCTGTTGCGCCCCAACGTGCTGCCGCTGGAC
GACATCGGCCTGATCAACGCGATCTCGCAGAACTATTTCAGTGGCGAGCCCGTCACTCGCAGCGAGGCGCGCGAGGTCGC
CGCCAACTGGGAGCCGTGGCGCACGGTGGCCACGTGGTACATGTGGCGCAGCCTCGACACGGCCACCACCTATTGA

Upstream 100 bases:

>100_bases
CCGCCAAGGCCGCGCGTGATTTCGCACGCGCCGACGGCATCCGCGCCGATCTGCTGGCGGCCGGCATCGTGCTCGAAGAC
AAGCCGGGCGGCGTGACCGA

Downstream 100 bases:

>100_bases
CCTGTCCATTCCGATGAAACGTGGCGTGTCTGCGGCCGGTCAAAATCCGGTAGAATGCGCGCCTTCAAGAGCCTTCCGGG
GAATCCATGAAAACAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
METRMNAVAKKAGVARAATVRKAAPAKAPAAKKAAAKRVDGVASKTVAAKGAVIQAAKRAAGSRVPLPEVPATSEPLPVP
ADAVTLSGPPAYWQEACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEACPKLVPA
QFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGMVHVAKWAEMEDEDVIAELTQIRGIGRWTAEMFLMFNLLRPNVLPLD
DIGLINAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDTATTY

Sequences:

>Translated_291_residues
METRMNAVAKKAGVARAATVRKAAPAKAPAAKKAAAKRVDGVASKTVAAKGAVIQAAKRAAGSRVPLPEVPATSEPLPVP
ADAVTLSGPPAYWQEACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEACPKLVPA
QFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGMVHVAKWAEMEDEDVIAELTQIRGIGRWTAEMFLMFNLLRPNVLPLD
DIGLINAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDTATTY
>Mature_291_residues
METRMNAVAKKAGVARAATVRKAAPAKAPAAKKAAAKRVDGVASKTVAAKGAVIQAAKRAAGSRVPLPEVPATSEPLPVP
ADAVTLSGPPAYWQEACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEACPKLVPA
QFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGMVHVAKWAEMEDEDVIAELTQIRGIGRWTAEMFLMFNLLRPNVLPLD
DIGLINAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDTATTY

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320990, Length=203, Percent_Identity=33.0049261083744, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 31689; Mature: 31689

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRMNAVAKKAGVARAATVRKAAPAKAPAAKKAAAKRVDGVASKTVAAKGAVIQAAKRA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSRVPLPEVPATSEPLPVPADAVTLSGPPAYWQEACADLMKRDRILRKIIPAFGPAHLA
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SRGDPFVTLARSIVGQQISVKAAQSVWERLVEACPKLVPAQFLRAGHEKLAGCGLSKRKA
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EYILDLAEHFRNGMVHVAKWAEMEDEDVIAELTQIRGIGRWTAEMFLMFNLLRPNVLPLD
HHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
DIGLINAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDTATTY
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METRMNAVAKKAGVARAATVRKAAPAKAPAAKKAAAKRVDGVASKTVAAKGAVIQAAKRA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSRVPLPEVPATSEPLPVPADAVTLSGPPAYWQEACADLMKRDRILRKIIPAFGPAHLA
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SRGDPFVTLARSIVGQQISVKAAQSVWERLVEACPKLVPAQFLRAGHEKLAGCGLSKRKA
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EYILDLAEHFRNGMVHVAKWAEMEDEDVIAELTQIRGIGRWTAEMFLMFNLLRPNVLPLD
HHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
DIGLINAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDTATTY
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]