| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545853
Identifier: 17545853
GI number: 17545853
Start: 1191477
End: 1192283
Strand: Direct
Name: 17545853
Synonym: RSc1134
Alternate gene names: NA
Gene position: 1191477-1192283 (Clockwise)
Preceding gene: 17545849
Following gene: 17545854
Centisome position: 32.06
GC content: 72.99
Gene sequence:
>807_bases ATGTCACTGCGCCACGAGGCGCTGGCCGCCCTGTGCCTGACCGATCCCGCCGACAAGGCCGACGCCACGCTGCGCCTGGG CGAGCGTGCCCGGACGGCGGACGATTCCGCGTGGCTTGCCGACGCGCCGATCGTTGCGCCGGCCGCCGGCATCCCGGGTC GCCCGGCGGCGCCGGTGCTGGTGCCGCCCAGCGAGGTGCCGCGTCGCCGCGCGATCGATACGCCGCACGGGCGGGCCGTG CTGCTGCATGCGCTGGCGCACATCGAGTTCAACGCCATCAACCTTGCGCTCGACGCCGTGTGGCGCTTTGCCGGCATGCC GGTCGCGTTCTATCGGGATTGGATGCGCGTGGCGGCGGAGGAGGCGACGCACTTTTCGCTGCTGTCGGCCCATCTGGCCA CGCTCGATTGCCGCTATGGCGATCATCCTGCCCACGACGGTCTGTGGCAGATGACCGAGAAGACCGCCGCCGACCCGCTC GCCCGCATGGCGCTGGTGCCGCGCACGCTGGAGGCCCGCGGGCTGGACGCCTCGCCGCCGATCCGCGCGAAGCTGGCCGC CGCCGGCGACATGGCCGCTGCCGGCATCCTCGACATCATCCTGCGCGACGAAATCGGCCACGTGGCGGTGGGCAACCGCT GGTACCGCTGGTTGTGCGGGCGCGCCGGACTGGACCCGCTGCCGACCTATCGCCGGCTCGCCGAGCAGTACGGCGCCCCG CGCCTGCGCGGCCCGTTCAACCTCGATGCCCGCCGCCAGGCCGGCTTCGACGACGACGAGATCGCCGCGCTCGAGGCCAG CTTCTAA
Upstream 100 bases:
>100_bases GCGCGCCTTCAAGCGCGGCCGGGCGGCCGGCTCGACACGTCGAATTAAAATGCCGGAAAGCCCGGATTGTACGCCCATGA CCTCATTCCAGCCGCCTGCC
Downstream 100 bases:
>100_bases GCCGCGCGCGCCGGGCGGGGCACCGGTATAATCGCCAGAAAAACGAACGACCGTTCGATTCCTTCCCGGCGAGGCAACCA TGGACTCCACCACCCCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVPPSEVPRRRAIDTPHGRAV LLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPL ARMALVPRTLEARGLDASPPIRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP RLRGPFNLDARRQAGFDDDEIAALEASF
Sequences:
>Translated_268_residues MSLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVPPSEVPRRRAIDTPHGRAV LLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPL ARMALVPRTLEARGLDASPPIRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP RLRGPFNLDARRQAGFDDDEIAALEASF >Mature_267_residues SLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVPPSEVPRRRAIDTPHGRAVL LHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLA RMALVPRTLEARGLDASPPIRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAPR LRGPFNLDARRQAGFDDDEIAALEASF
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 29093; Mature: 28961
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVL CCCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE VPPSEVPRRRAIDTPHGRAVLLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAE ECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLARMALVPRTLEARGLDASPP HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC IRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP HHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHCCC RLRGPFNLDARRQAGFDDDEIAALEASF CCCCCCCCCCHHHCCCCCCCEEEEECCC >Mature Secondary Structure SLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVL CCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE VPPSEVPRRRAIDTPHGRAVLLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAE ECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLARMALVPRTLEARGLDASPP HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC IRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP HHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHCCC RLRGPFNLDARRQAGFDDDEIAALEASF CCCCCCCCCCHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]