| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hslO [H]
Identifier: 17545851
GI number: 17545851
Start: 1189797
End: 1190813
Strand: Reverse
Name: hslO [H]
Synonym: RSc1132
Alternate gene names: 17545851
Gene position: 1190813-1189797 (Counterclockwise)
Preceding gene: 17545852
Following gene: 17545850
Centisome position: 32.04
GC content: 68.44
Gene sequence:
>1017_bases ATGACTGACGAGCTGAAGAAATTCGTATTCGACGCCGCCCCGGTGCGCGGTGAACTGGTGCGGCTGGAGGGAACCTGGCA GGAAGTCCTGCGCCGCCGCCACTACCCCGCCCCGGTGCGCACGCTGCTGGGCGGGATGATGGCCGCCGCCGCGCTGCTGT CGGCCAACCTGAAGTTCAACGGCGCGCTGATCATGCAGCTGCACGGTGACGGGCCGCTGCGCATGCTGGTGGTGGAGTGC AATTCCGACCTGTCGATGCGCGCCACCGCCAAGCTGGTCGAAGGCGCCCAGATCGCGGACGACGCCACGCTGGCGTCGCT GGTCAACCAGCACGGCCACGGCCGCTTCGCCATCACGCTGGATCCGCAGGACAAACTGCCCGGCCAGCAGCCCTACCAGG GCATCGTCCCGCTGTCCGACGAGCATGGCCCGCTCACCAGCATGACCGCCGTGCTGGAGCACTACATGCAGACCTCCGAG CAGCTCGACACGCGGCTGTGGCTGGCCGCCGACGACAAGATCGCCTCGGGCATGCTACTGCAGCGACTGCCGTCTTACGG CGGCGCGATGGAAGGCCACCCCGGCCATGGGCCCGCGGAAGTAGGCGAGACCGGCCAGCCGCTGCGCGAAGACGTGCACG GCCAGGACCTCGACACCTGGGAGCGCGTCTGCCAGCTCGGCGCGACGCTGCGCCGGGACGAACTGCTGGAGCAGCCCGTC GACACGCTCATCAAGCGGCTCTACTGGGAAGAGATGGAGCACGCCGGCATCCGCATGTTCGAGCCGGTCCTGCCGCGTTT CCGCTGCTCGTGCACGCGGCTGCGGGTCGGCGCGATGCTGCGCACGCTGGGCCAGGAAGAGATCGACGACATCCTGCAGG AGCGCGGCGGCAAGGTGGAAATCGATTGCGAGTTCTGCGGCCAGCACTACGCGTTCGACGCTGTCGATTGTGCGCAGCTG TTCGCGCAGGACACCGTGGTGCAGGGCGTGCAGAGCGCCTCCGACCAGCGTCACTGA
Upstream 100 bases:
>100_bases GGGAACTGACGGACGACGACATCGCCAAGATGCGCCTCAACACCGAGACGTACGCGGTACGCCAGGCGATGTACAAGCAG CAATTGAAACGGATCGATGG
Downstream 100 bases:
>100_bases CCGTCACTGACCACCGGGGCACGCGCCGGCGACATACTATGAAGATGCGCCAGCAGCGGCACTTTCGCGCGCGGCTGCCG CTCCAAGCGTCGGTCCGATA
Product: redox regulated molecular chaperone heat-shock-like protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFNGALIMQLHGDGPLRMLVVEC NSDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITLDPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSE QLDTRLWLAADDKIASGMLLQRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPV DTLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVEIDCEFCGQHYAFDAVDCAQL FAQDTVVQGVQSASDQRH
Sequences:
>Translated_338_residues MTDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFNGALIMQLHGDGPLRMLVVEC NSDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITLDPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSE QLDTRLWLAADDKIASGMLLQRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPV DTLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVEIDCEFCGQHYAFDAVDCAQL FAQDTVVQGVQSASDQRH >Mature_337_residues TDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFNGALIMQLHGDGPLRMLVVECN SDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITLDPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSEQ LDTRLWLAADDKIASGMLLQRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPVD TLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVEIDCEFCGQHYAFDAVDCAQLF AQDTVVQGVQSASDQRH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=322, Percent_Identity=33.8509316770186, Blast_Score=182, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 37534; Mature: 37403
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFN CCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEC GALIMQLHGDGPLRMLVVECNSDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITL CEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE DPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSEQLDTRLWLAADDKIASGMLL CCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHH QRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPV HHCCCCCCCCCCCCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DTLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEE IDCEFCGQHYAFDAVDCAQLFAQDTVVQGVQSASDQRH EEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFN CHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEC GALIMQLHGDGPLRMLVVECNSDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITL CEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE DPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSEQLDTRLWLAADDKIASGMLL CCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHH QRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPV HHCCCCCCCCCCCCCCCCHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DTLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEE IDCEFCGQHYAFDAVDCAQLFAQDTVVQGVQSASDQRH EEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]