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The map label for this gene is ycfJ [C]

Identifier: 17545746

GI number: 17545746

Start: 1078598

End: 1079350

Strand: Reverse

Name: ycfJ [C]

Synonym: RSc1027

Alternate gene names: 17545746

Gene position: 1079350-1078598 (Counterclockwise)

Preceding gene: 17545747

Following gene: 17545736

Centisome position: 29.04

GC content: 70.25

Gene sequence:

>753_bases
ATGATGAACAACATGCAACCGAACACCCAGGGTCAACAGTACGCCGGCGCCTCGCCGGGCCAGGTGCCGCAGTCGCGCCG
CATGCATCCGCTGGTCGCCACGGCGGCCGTCGCGGTGATCATCGCCAGCCTGACAGCGGTGGCGGCCATCACCGGCGTGC
TGCCGATCTCGAAGGCCACGCAGGGCAGCACCGATCCGAACGTCGCCGCGCAGTCGTCGACCGCAACCGCTGCCTCCGCG
CCAATGGCGCTGGCCGCCCCCGGCATGGCTGCCCCGAACCAGGCAACGCCGTATCCGGCCCAGCAGAACGTGGCGCCGGC
ACAGCCGCCGGTCCATCATCGCCAGCCGGCCTATGCGGAACGCACGCCCTCCCCGTCCACCAGCCCGAGCTACGCGCAAA
CGCAGCCGCGCGCATCGGCCAGCCCGTATGCCGGTCAGGTGACGTCGATCACGCCGATCACAACGCAAGGTAATGAAACC
GGCCTGGGCGTGATCGGCGGTGCGGTGGTGGGTGGCCTGCTGGGTAACCAGGTCGGTAACGGCAACGGCCGCACACTGGC
CACCGTGGCGGGCGCGCTGGGCGGCGGCTACGCCGGCCACGTGGCCGAGAACCACTACAACCGCGACACCCAGTATCGCG
TGAACGTGCGCATGGACAACGGCTCGACCCGCAGCTTCACGTACAAGGCCGCGCCGGGCTTCCAGGTGGGCGACCGCGTG
CACCTGGAGAACGGTGGCCTGGTGGCGGGCTGA

Upstream 100 bases:

>100_bases
TTTACGCTACAGATGCTTACAAATTAAAACGGCATCGACCGGGGCGATCCACCACACTGTCAACATCGAAGGGCCAACGG
ACAACGGCCGCAGGAGAACG

Downstream 100 bases:

>100_bases
CCCGCCTCACCCGCCCCAACGAAAAACCGGCCCTCGGGCCAAATGCCGTTCAGTTAAGCATGACTTGGCAGGCTCGCGGC
AACGAGAGCTGAGTCAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Spanning Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MMNNMQPNTQGQQYAGASPGQVPQSRRMHPLVATAAVAVIIASLTAVAAITGVLPISKATQGSTDPNVAAQSSTATAASA
PMALAAPGMAAPNQATPYPAQQNVAPAQPPVHHRQPAYAERTPSPSTSPSYAQTQPRASASPYAGQVTSITPITTQGNET
GLGVIGGAVVGGLLGNQVGNGNGRTLATVAGALGGGYAGHVAENHYNRDTQYRVNVRMDNGSTRSFTYKAAPGFQVGDRV
HLENGGLVAG

Sequences:

>Translated_250_residues
MMNNMQPNTQGQQYAGASPGQVPQSRRMHPLVATAAVAVIIASLTAVAAITGVLPISKATQGSTDPNVAAQSSTATAASA
PMALAAPGMAAPNQATPYPAQQNVAPAQPPVHHRQPAYAERTPSPSTSPSYAQTQPRASASPYAGQVTSITPITTQGNET
GLGVIGGAVVGGLLGNQVGNGNGRTLATVAGALGGGYAGHVAENHYNRDTQYRVNVRMDNGSTRSFTYKAAPGFQVGDRV
HLENGGLVAG
>Mature_250_residues
MMNNMQPNTQGQQYAGASPGQVPQSRRMHPLVATAAVAVIIASLTAVAAITGVLPISKATQGSTDPNVAAQSSTATAASA
PMALAAPGMAAPNQATPYPAQQNVAPAQPPVHHRQPAYAERTPSPSTSPSYAQTQPRASASPYAGQVTSITPITTQGNET
GLGVIGGAVVGGLLGNQVGNGNGRTLATVAGALGGGYAGHVAENHYNRDTQYRVNVRMDNGSTRSFTYKAAPGFQVGDRV
HLENGGLVAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25276; Mature: 25276

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNMQPNTQGQQYAGASPGQVPQSRRMHPLVATAAVAVIIASLTAVAAITGVLPISKAT
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGSTDPNVAAQSSTATAASAPMALAAPGMAAPNQATPYPAQQNVAPAQPPVHHRQPAYAE
CCCCCCCCEECCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RTPSPSTSPSYAQTQPRASASPYAGQVTSITPITTQGNETGLGVIGGAVVGGLLGNQVGN
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
GNGRTLATVAGALGGGYAGHVAENHYNRDTQYRVNVRMDNGSTRSFTYKAAPGFQVGDRV
CCCCCHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEE
HLENGGLVAG
EECCCCEECC
>Mature Secondary Structure
MMNNMQPNTQGQQYAGASPGQVPQSRRMHPLVATAAVAVIIASLTAVAAITGVLPISKAT
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGSTDPNVAAQSSTATAASAPMALAAPGMAAPNQATPYPAQQNVAPAQPPVHHRQPAYAE
CCCCCCCCEECCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
RTPSPSTSPSYAQTQPRASASPYAGQVTSITPITTQGNETGLGVIGGAVVGGLLGNQVGN
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
GNGRTLATVAGALGGGYAGHVAENHYNRDTQYRVNVRMDNGSTRSFTYKAAPGFQVGDRV
CCCCCHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEE
HLENGGLVAG
EECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA