| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545717
Identifier: 17545717
GI number: 17545717
Start: 1049047
End: 1049919
Strand: Reverse
Name: 17545717
Synonym: RSc0998
Alternate gene names: NA
Gene position: 1049919-1049047 (Counterclockwise)
Preceding gene: 17545720
Following gene: 17545716
Centisome position: 28.25
GC content: 65.52
Gene sequence:
>873_bases ATGAACCCGACCCAGACGTCCGCCCGGCCCGCGCGCTTCGAAGGCTCCGACCAGTACGTCGCCACCGACGATCTCAAGCT CGCCGTCAACGCGGCGATGACGCTGCAGCGCCCGCTGCTGATCAAGGGCGAGCCGGGCACGGGCAAGACCATGCTGGCCG AGGAGGTGGCCGCCGCGCTCGGCATGCCGCTGCTGCAATGGCACGTCAAATCGACCACCAAGGCGCAGCAGGGCCTCTAC GAATACGATGCCGTGTCGCGGCTGCGCGATTCGCAGCTGGGCGACGGCCGCGTCCACGACATCCGCAACTACATCGTCAA GGGTGTGCTGTGGCAAGCGTTCGAGGCCGCGCAGCAGACGGTGCTGCTGATCGACGAGATCGACAAGGCCGACATCGAAT TCCCCAACGACCTGCTGCGCGAGCTCGACCGCATGGAGTTCTACGTGTACGAGACGCGCGAGACCATCCGCGCCCGGCAC CGGCCGCTGGTCATCATCACGTCGAACAACGAGAAGGAGCTGCCCGATGCCTTCCTGCGCCGCTGCTTCTTCCACTACAT CCGGTTTCCCGATGCCGAGACGATGCAGCGAATCGTCGACGTGCACTACCCCGGCATCAAGCCGACGCTGGTGAAGGCCG CGCTGGACGCCTTCTACGAGATGCGCAACCTGCCGGGGCTCAAGAAGAAGCCCTCCACCTCCGAGCTGATCGACTGGCTC AAGCTGCTGCTGGCCGAAGACATCCCGCCCGATACGCTGCGCAGCCAGGATCGGAACGCCGCCATTCCGCCGCTGCACGG CGCCCTGCTCAAGAATGAGCAGGACGTGCACCTGTTCGAGCGCCTGGTGTTCATGAACCGCGCCAACCGCTGA
Upstream 100 bases:
>100_bases CCCCCCTGACCCGGCGCCGGGAAAAGCCCCCGCGTCAGACCGCCAAACTCTCTTATACTGGCCGTCTCCGCATCCATTTA CCGCCCAGTAGGATTGCTCG
Downstream 100 bases:
>100_bases GGACACCCGGAACATGACGCGCTTCATCGAACCCGTCACCCTGTCCGGCCGGCACGCGTGGCTGGAGCCGCTGGGCCGCG AGCACGAAGCCGACGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; ATPase AAA Family Protein; AAA_5 ATPase; AAA ATPase; ATPase-Like Protein; ATPase Associated With Various Cellular Activities; MoxR Family ATPase; ATPase Aaa Family; Chaperone ClpB; Oxidoreductase; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ClpA/ClpB Family Protein; AAA ATPase Family Protein; ATPase Protein; Carbon Monoxide Dehydrogenase D Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNPTQTSARPARFEGSDQYVATDDLKLAVNAAMTLQRPLLIKGEPGTGKTMLAEEVAAALGMPLLQWHVKSTTKAQQGLY EYDAVSRLRDSQLGDGRVHDIRNYIVKGVLWQAFEAAQQTVLLIDEIDKADIEFPNDLLRELDRMEFYVYETRETIRARH RPLVIITSNNEKELPDAFLRRCFFHYIRFPDAETMQRIVDVHYPGIKPTLVKAALDAFYEMRNLPGLKKKPSTSELIDWL KLLLAEDIPPDTLRSQDRNAAIPPLHGALLKNEQDVHLFERLVFMNRANR
Sequences:
>Translated_290_residues MNPTQTSARPARFEGSDQYVATDDLKLAVNAAMTLQRPLLIKGEPGTGKTMLAEEVAAALGMPLLQWHVKSTTKAQQGLY EYDAVSRLRDSQLGDGRVHDIRNYIVKGVLWQAFEAAQQTVLLIDEIDKADIEFPNDLLRELDRMEFYVYETRETIRARH RPLVIITSNNEKELPDAFLRRCFFHYIRFPDAETMQRIVDVHYPGIKPTLVKAALDAFYEMRNLPGLKKKPSTSELIDWL KLLLAEDIPPDTLRSQDRNAAIPPLHGALLKNEQDVHLFERLVFMNRANR >Mature_290_residues MNPTQTSARPARFEGSDQYVATDDLKLAVNAAMTLQRPLLIKGEPGTGKTMLAEEVAAALGMPLLQWHVKSTTKAQQGLY EYDAVSRLRDSQLGDGRVHDIRNYIVKGVLWQAFEAAQQTVLLIDEIDKADIEFPNDLLRELDRMEFYVYETRETIRARH RPLVIITSNNEKELPDAFLRRCFFHYIRFPDAETMQRIVDVHYPGIKPTLVKAALDAFYEMRNLPGLKKKPSTSELIDWL KLLLAEDIPPDTLRSQDRNAAIPPLHGALLKNEQDVHLFERLVFMNRANR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33226; Mature: 33226
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTQTSARPARFEGSDQYVATDDLKLAVNAAMTLQRPLLIKGEPGTGKTMLAEEVAAAL CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH GMPLLQWHVKSTTKAQQGLYEYDAVSRLRDSQLGDGRVHDIRNYIVKGVLWQAFEAAQQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE VLLIDEIDKADIEFPNDLLRELDRMEFYVYETRETIRARHRPLVIITSNNEKELPDAFLR EEEEECCCCCCCCCCHHHHHHHHHHHEEEEHHHHHHHHHCCCEEEEECCCCCCCHHHHHH RCFFHYIRFPDAETMQRIVDVHYPGIKPTLVKAALDAFYEMRNLPGLKKKPSTSELIDWL HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KLLLAEDIPPDTLRSQDRNAAIPPLHGALLKNEQDVHLFERLVFMNRANR HHHHHCCCCCHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPTQTSARPARFEGSDQYVATDDLKLAVNAAMTLQRPLLIKGEPGTGKTMLAEEVAAAL CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH GMPLLQWHVKSTTKAQQGLYEYDAVSRLRDSQLGDGRVHDIRNYIVKGVLWQAFEAAQQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE VLLIDEIDKADIEFPNDLLRELDRMEFYVYETRETIRARHRPLVIITSNNEKELPDAFLR EEEEECCCCCCCCCCHHHHHHHHHHHEEEEHHHHHHHHHCCCEEEEECCCCCCCHHHHHH RCFFHYIRFPDAETMQRIVDVHYPGIKPTLVKAALDAFYEMRNLPGLKKKPSTSELIDWL HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KLLLAEDIPPDTLRSQDRNAAIPPLHGALLKNEQDVHLFERLVFMNRANR HHHHHCCCCCHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA