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The map label for this gene is ydeK [H]

Identifier: 17545706

GI number: 17545706

Start: 1037956

End: 1038897

Strand: Reverse

Name: ydeK [H]

Synonym: RSc0987

Alternate gene names: 17545706

Gene position: 1038897-1037956 (Counterclockwise)

Preceding gene: 17545707

Following gene: 17545705

Centisome position: 27.95

GC content: 74.42

Gene sequence:

>942_bases
ATGACCCGGTCCACCGCCCTGCCGCTCGGCCATGCGCCCGACCACGCCGAACGCCGCGGCCTGCTGCTCGGCTTCATCGG
CGTGACGATCTTCAGCCAGACGCTGCCCTTCACGCGGATGGCGGTGGCCGAGCTGGACGCCACCTTCGTCGCGCTGGCCC
ACGCGGTGCTGGCCAGCCTGCTCGCGCTGGCGCTGCTGGCCGCGACCGGCGCGCTGCGCGCTGCGCGCCGCCCGCGCGGC
GGCCAGTGGGGCAGGCTGGCCGTCACGGCGGCGGGCGTGGTGGTGGGCTTTCCGCTGTTCTCGTCGCTGGCGATGCGCGA
TGTGCCGGCCGCGCACGGTGCCATCATCACCGGCCTGCTGCCGCTGGCGACCGCCCTCTTTGCCGCGTGGTTCGGGCGCG
AGCGGCCGTCGCCATGGTTCTGGGCGTGCGCGCTGGCCGGCAGCGTGCTGGTGGTGTCATTCGCGCTGCTGCGCGGCGCC
GGCACCCTGCACCGCGCCGACTGGCTGCTGTTCGCCGCCATGGTGGCGGGCGCCCTCGGCTACGCGGTGGGCGGCAAGCT
TTCGCGCGAGCTGGGCGGCACGCAGACGATCGCCTGGGCGCTGGTGGTGTCGCTGCCTGCGCTGCTGCCGGTGGTCGGCG
CCCTGGCCTGGCTGCCGGGCACACACCAGGCCGCGGCGCTCGCGCAGGCATCCGGCCACGCATGGCTGGGGCTGGCCTAC
GTGTCGGCCTTCTCCATGTTCGTCGGCTTCCTGTTCTGGTATTCGGGGCTGGCCGCGGGCGGGGTCGCGCGGGTCGGCCA
GATACAATTGCTGCAGCCGTTCATGACGCTGATCGGCGGCTGGCTCCTGCTGGGCGAGCCGCTCGATGCGCCGACGATGC
TGTTCGCCCTGGCCGTGATCGCCGTGGTCGGCCTCGGCCGGCGGACCGCCGTGCGGCGATAG

Upstream 100 bases:

>100_bases
CGGGCGAGATCGGTCGCGCCACCGTCACCAAAATCGAAAAGAAGAGCCGCCAGAACCGCCGCGTGGTGGTGGCGCTGGCC
GATGAGATCAGGAGCACGCC

Downstream 100 bases:

>100_bases
CGCCATCGGCTGCGTCTCCCTGTGCTTATTTACCGTTTTCGATAAGGAATCTTCATGACCGCCACCCAAGACATCCAGGC
CAGGCTGAAACAGCTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTRSTALPLGHAPDHAERRGLLLGFIGVTIFSQTLPFTRMAVAELDATFVALAHAVLASLLALALLAATGALRAARRPRG
GQWGRLAVTAAGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATALFAAWFGRERPSPWFWACALAGSVLVVSFALLRGA
GTLHRADWLLFAAMVAGALGYAVGGKLSRELGGTQTIAWALVVSLPALLPVVGALAWLPGTHQAAALAQASGHAWLGLAY
VSAFSMFVGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGEPLDAPTMLFALAVIAVVGLGRRTAVRR

Sequences:

>Translated_313_residues
MTRSTALPLGHAPDHAERRGLLLGFIGVTIFSQTLPFTRMAVAELDATFVALAHAVLASLLALALLAATGALRAARRPRG
GQWGRLAVTAAGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATALFAAWFGRERPSPWFWACALAGSVLVVSFALLRGA
GTLHRADWLLFAAMVAGALGYAVGGKLSRELGGTQTIAWALVVSLPALLPVVGALAWLPGTHQAAALAQASGHAWLGLAY
VSAFSMFVGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGEPLDAPTMLFALAVIAVVGLGRRTAVRR
>Mature_312_residues
TRSTALPLGHAPDHAERRGLLLGFIGVTIFSQTLPFTRMAVAELDATFVALAHAVLASLLALALLAATGALRAARRPRGG
QWGRLAVTAAGVVVGFPLFSSLAMRDVPAAHGAIITGLLPLATALFAAWFGRERPSPWFWACALAGSVLVVSFALLRGAG
TLHRADWLLFAAMVAGALGYAVGGKLSRELGGTQTIAWALVVSLPALLPVVGALAWLPGTHQAAALAQASGHAWLGLAYV
SAFSMFVGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGEPLDAPTMLFALAVIAVVGLGRRTAVRR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32545; Mature: 32414

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSTALPLGHAPDHAERRGLLLGFIGVTIFSQTLPFTRMAVAELDATFVALAHAVLASL
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LALALLAATGALRAARRPRGGQWGRLAVTAAGVVVGFPLFSSLAMRDVPAAHGAIITGLL
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PLATALFAAWFGRERPSPWFWACALAGSVLVVSFALLRGAGTLHRADWLLFAAMVAGALG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YAVGGKLSRELGGTQTIAWALVVSLPALLPVVGALAWLPGTHQAAALAQASGHAWLGLAY
HHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
VSAFSMFVGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGEPLDAPTMLFALAVI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AVVGLGRRTAVRR
HHHCCCCHHHCCC
>Mature Secondary Structure 
TRSTALPLGHAPDHAERRGLLLGFIGVTIFSQTLPFTRMAVAELDATFVALAHAVLASL
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LALALLAATGALRAARRPRGGQWGRLAVTAAGVVVGFPLFSSLAMRDVPAAHGAIITGLL
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PLATALFAAWFGRERPSPWFWACALAGSVLVVSFALLRGAGTLHRADWLLFAAMVAGALG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YAVGGKLSRELGGTQTIAWALVVSLPALLPVVGALAWLPGTHQAAALAQASGHAWLGLAY
HHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
VSAFSMFVGFLFWYSGLAAGGVARVGQIQLLQPFMTLIGGWLLLGEPLDAPTMLFALAVI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AVVGLGRRTAVRR
HHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]