| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is rhlE [H]
Identifier: 17545671
GI number: 17545671
Start: 1000548
End: 1002374
Strand: Reverse
Name: rhlE [H]
Synonym: RSc0952
Alternate gene names: 17545671
Gene position: 1002374-1000548 (Counterclockwise)
Preceding gene: 17545674
Following gene: 17545668
Centisome position: 26.97
GC content: 70.01
Gene sequence:
>1827_bases ATGACGCAGCCTCAAAACGGCAGCGGCGCGATTGCGCACGCTGAATCCGATACCGATACCCTGATCGCCAACGCCGCCAC CCAGGCCAGCGCTTTTGCCGCGCTCGGCCTGGACGAACGCATCGCCCGCGCGCTCGGCGAACTGAACTACACCCAGCCGA CGCCGGTCCAGGCCCAAGCGATTCCCGCCTGCCTGTCGGGCCGCGACCTGCTGGTCACGAGCCAGACCGGCTCGGGCAAG ACCGCGGCGTTCATGCTGCCGGCCATCCAGCGCATCAGCGAACAGCCCGAGCCGCAGCGCCCGCGCGCCGACGGCCCGCA GCAGCGCGTCAAAGGCCGCCGTCCGCGCCCGGCGCCGGCCAAGCCGTCGCTGCTGGTGCTCACGCCCACGCGCGAACTCG CCCTGCAGGTGACGACCGCCACCGCACAATACGGCCGCCACCTGCGCCGCATCGTCTGCGCGAGCATCCTGGGCGGCATG CCCTACCCCAAGCAGCTCGACATGCTGGCGCGCATGCCTGACATCATCATCGCCACGCCGGGCCGCCTGCTCGACCACAT CGACTCCGGCCGCATCGACCTGTCGGCGCTCGACATGCTGGTCTTCGACGAGGCCGACCGCATGCTCGACATGGGCTTCG CCGACGACATCGAAGCCATCGTCGGCGCCACGCCGGCGTCGCGCCAGATGCTGATGTTCTCGGCCACCATGGACCGCCGC ATCGAGCAGCTCGCCGAGCGCATGATGCGCGAGCCGCAACGCATCGAGATCGCCGCCGCGCGTATCGACCAAAGCCATAT CGAAGAGCGCCTGCACTTCACCGACGACCTGTCGCACAAGCAGCAGTTGCTCGACCACCTGCTGCGCGATGCGACGCTCA AGCAGGCCATCGTCTTTACCGCCACGAAGCGCGATGCCGACTCGCTGGCCGAGCGCCTGACCGAGACCGGTTTCTCCGCC GGCGCCCTGCACGGCGACATGCACCAAGGTGCGCGCAATCGTACGCTGACGGCGCTGCGCCGCGGCCAACTGCGCGTGCT GGTGGCCACCGACGTGGCCGCGCGCGGCATCGACGTGCCGGACATCACCCACGTGGTCAACTTTGACCTGCCCAAGCAGG CTGAAGACTACGTGCACCGCATCGGCCGCACCGGCCGCGCCGGCCGCAGCGGCATCGCCATCAACCTGGTGAACCACGGC GATACGTTCCAATGGCGCCGCATCGAGCGCTTTGTCGACCGCCGCATCGACGCGACTGTCGTCGAGGGCCTCGAACCGAA GCGCTCGCCCAAGCCGCGCAGCGGCGGCCCGCGCGCCGGTGGCGACCGCGGCGGCTACCGTGGCAATGGCGGCGGCAACT GGCGTGGCCAGCGTGACGGCTACGCCGCGCGCACGGGTAACGGCGGCAATGGCGGCAACAGCGAAGGCCGCTTCCAGCGC AGCTTCGGCGGTGACCGCGAAAGCTTCGCCCCGCGCCGCGATGACCGTGGCGACCGCGGCACCGGCTATCAAGGCGGCCA ACAACGCGACTGGGGCAACCGTGACAACGCGGCCCCGCGCCAGTCGTACGGCCAGCAAACCCGCAACGGCGACCGCTTCG ACCCGCGCCAGCCGCGCAGCCAGGAAGGCCGCAGCGATTGGCAGCAACGCCCGGCACGCGGCGGTTACGGCAATAGCAAC GGCAATGGCAGCAGCTACGGCAACCGCGATGGCGCCCCGCGCCGCTTCGGTGACGACAACAGCAACGGCGCGCCCCGCCG CAGCTATGGCAACAGCAATGGCAACAGCTACGGCAGCAAGGGCCGCTCGCGCGATTTCGATCGCTGA
Upstream 100 bases:
>100_bases CGATTGGCGCCGACGCCCCGTGATTAACCGGTCGCCGTTCTCTTTTCCGTTGTCTGCATCGCATGATGCGGCAACGCGGC AGCCCAACCTACGATTCGAC
Downstream 100 bases:
>100_bases TCGGCTACGCGCATCGCCGCCATGAAGAAAGGCCCCATCCGGGGCCTTTCTGTTTTCCGGCGCCCGCTTTACAGGGCGCA GGTGCGGAAGCCGACAAAGA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MTQPQNGSGAIAHAESDTDTLIANAATQASAFAALGLDERIARALGELNYTQPTPVQAQAIPACLSGRDLLVTSQTGSGK TAAFMLPAIQRISEQPEPQRPRADGPQQRVKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRHLRRIVCASILGGM PYPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADRMLDMGFADDIEAIVGATPASRQMLMFSATMDRR IEQLAERMMREPQRIEIAAARIDQSHIEERLHFTDDLSHKQQLLDHLLRDATLKQAIVFTATKRDADSLAERLTETGFSA GALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHG DTFQWRRIERFVDRRIDATVVEGLEPKRSPKPRSGGPRAGGDRGGYRGNGGGNWRGQRDGYAARTGNGGNGGNSEGRFQR SFGGDRESFAPRRDDRGDRGTGYQGGQQRDWGNRDNAAPRQSYGQQTRNGDRFDPRQPRSQEGRSDWQQRPARGGYGNSN GNGSSYGNRDGAPRRFGDDNSNGAPRRSYGNSNGNSYGSKGRSRDFDR
Sequences:
>Translated_608_residues MTQPQNGSGAIAHAESDTDTLIANAATQASAFAALGLDERIARALGELNYTQPTPVQAQAIPACLSGRDLLVTSQTGSGK TAAFMLPAIQRISEQPEPQRPRADGPQQRVKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRHLRRIVCASILGGM PYPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADRMLDMGFADDIEAIVGATPASRQMLMFSATMDRR IEQLAERMMREPQRIEIAAARIDQSHIEERLHFTDDLSHKQQLLDHLLRDATLKQAIVFTATKRDADSLAERLTETGFSA GALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHG DTFQWRRIERFVDRRIDATVVEGLEPKRSPKPRSGGPRAGGDRGGYRGNGGGNWRGQRDGYAARTGNGGNGGNSEGRFQR SFGGDRESFAPRRDDRGDRGTGYQGGQQRDWGNRDNAAPRQSYGQQTRNGDRFDPRQPRSQEGRSDWQQRPARGGYGNSN GNGSSYGNRDGAPRRFGDDNSNGAPRRSYGNSNGNSYGSKGRSRDFDR >Mature_607_residues TQPQNGSGAIAHAESDTDTLIANAATQASAFAALGLDERIARALGELNYTQPTPVQAQAIPACLSGRDLLVTSQTGSGKT AAFMLPAIQRISEQPEPQRPRADGPQQRVKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRHLRRIVCASILGGMP YPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADRMLDMGFADDIEAIVGATPASRQMLMFSATMDRRI EQLAERMMREPQRIEIAAARIDQSHIEERLHFTDDLSHKQQLLDHLLRDATLKQAIVFTATKRDADSLAERLTETGFSAG ALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGD TFQWRRIERFVDRRIDATVVEGLEPKRSPKPRSGGPRAGGDRGGYRGNGGGNWRGQRDGYAARTGNGGNGGNSEGRFQRS FGGDRESFAPRRDDRGDRGTGYQGGQQRDWGNRDNAAPRQSYGQQTRNGDRFDPRQPRSQEGRSDWQQRPARGGYGNSNG NGSSYGNRDGAPRRFGDDNSNGAPRRSYGNSNGNSYGSKGRSRDFDR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=378, Percent_Identity=37.5661375661376, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI45446743, Length=378, Percent_Identity=37.5661375661376, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI38201710, Length=389, Percent_Identity=39.3316195372751, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI4758138, Length=377, Percent_Identity=38.1962864721485, Blast_Score=255, Evalue=1e-67, Organism=Homo sapiens, GI169881239, Length=390, Percent_Identity=38.974358974359, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI13514809, Length=390, Percent_Identity=38.974358974359, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI222352149, Length=368, Percent_Identity=38.8586956521739, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI20149629, Length=390, Percent_Identity=35.6410256410256, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI301171467, Length=381, Percent_Identity=38.8451443569554, Blast_Score=247, Evalue=3e-65, Organism=Homo sapiens, GI87196351, Length=381, Percent_Identity=39.1076115485564, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI301171475, Length=382, Percent_Identity=39.0052356020942, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI41327771, Length=393, Percent_Identity=36.1323155216285, Blast_Score=242, Evalue=1e-63, Organism=Homo sapiens, GI21071032, Length=373, Percent_Identity=36.1930294906166, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI148613856, Length=549, Percent_Identity=34.4262295081967, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=36.4611260053619, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI188035877, Length=372, Percent_Identity=36.0215053763441, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI224593278, Length=384, Percent_Identity=34.8958333333333, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI13518015, Length=376, Percent_Identity=35.1063829787234, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI262231852, Length=370, Percent_Identity=36.2162162162162, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI216548263, Length=376, Percent_Identity=35.1063829787234, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI31542656, Length=405, Percent_Identity=37.037037037037, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=33.6760925449871, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI164664518, Length=385, Percent_Identity=31.4285714285714, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI262118318, Length=370, Percent_Identity=36.2162162162162, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI7661920, Length=387, Percent_Identity=32.8165374677003, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI164419743, Length=399, Percent_Identity=33.5839598997494, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI51094101, Length=399, Percent_Identity=33.5839598997494, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI55749865, Length=375, Percent_Identity=32, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI41327776, Length=390, Percent_Identity=33.8461538461538, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI13129006, Length=393, Percent_Identity=32.5699745547074, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI83700235, Length=387, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI4503529, Length=396, Percent_Identity=32.3232323232323, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=31.9148936170213, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI164419732, Length=360, Percent_Identity=33.6111111111111, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI4758112, Length=394, Percent_Identity=27.9187817258883, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI18375623, Length=394, Percent_Identity=27.9187817258883, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI21040371, Length=376, Percent_Identity=27.9255319148936, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI38327634, Length=370, Percent_Identity=32.972972972973, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI17505907, Length=425, Percent_Identity=31.5294117647059, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI256223453, Length=393, Percent_Identity=29.5165394402036, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI6005743, Length=401, Percent_Identity=30.1745635910224, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI8922886, Length=401, Percent_Identity=30.1745635910224, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI62241022, Length=382, Percent_Identity=30.8900523560209, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI41327779, Length=376, Percent_Identity=30.8510638297872, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI38569505, Length=375, Percent_Identity=30.1333333333333, Blast_Score=169, Evalue=8e-42, Organism=Homo sapiens, GI9506931, Length=421, Percent_Identity=28.5035629453682, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=30.1333333333333, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI62241024, Length=360, Percent_Identity=31.3888888888889, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4826686, Length=350, Percent_Identity=30.5714285714286, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI9966805, Length=330, Percent_Identity=33.3333333333333, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI256773275, Length=415, Percent_Identity=30.8433734939759, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI20336298, Length=243, Percent_Identity=38.2716049382716, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI154759257, Length=432, Percent_Identity=28.2407407407407, Blast_Score=130, Evalue=4e-30, Organism=Escherichia coli, GI1787016, Length=402, Percent_Identity=43.5323383084577, Blast_Score=312, Evalue=4e-86, Organism=Escherichia coli, GI87082221, Length=393, Percent_Identity=41.9847328244275, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1788930, Length=395, Percent_Identity=41.5189873417722, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1787605, Length=353, Percent_Identity=44.1926345609065, Blast_Score=252, Evalue=5e-68, Organism=Escherichia coli, GI1790214, Length=420, Percent_Identity=36.1904761904762, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI48994977, Length=135, Percent_Identity=30.3703703703704, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17510307, Length=374, Percent_Identity=40.6417112299465, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995514, Length=374, Percent_Identity=40.6417112299465, Blast_Score=263, Evalue=3e-70, Organism=Caenorhabditis elegans, GI17510309, Length=374, Percent_Identity=40.6417112299465, Blast_Score=262, Evalue=3e-70, Organism=Caenorhabditis elegans, GI17555296, Length=392, Percent_Identity=35.4591836734694, Blast_Score=254, Evalue=7e-68, Organism=Caenorhabditis elegans, GI115533224, Length=449, Percent_Identity=35.4120267260579, Blast_Score=251, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17552642, Length=430, Percent_Identity=34.8837209302326, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=38.6243386243386, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI32565321, Length=393, Percent_Identity=36.8956743002545, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI86570094, Length=371, Percent_Identity=36.3881401617251, Blast_Score=236, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71987143, Length=403, Percent_Identity=33.9950372208437, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71995724, Length=387, Percent_Identity=32.8165374677003, Blast_Score=227, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17507121, Length=387, Percent_Identity=32.5581395348837, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17537549, Length=370, Percent_Identity=37.5675675675676, Blast_Score=225, Evalue=5e-59, Organism=Caenorhabditis elegans, GI71999644, Length=383, Percent_Identity=34.9869451697128, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71999646, Length=383, Percent_Identity=34.9869451697128, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507945, Length=377, Percent_Identity=36.0742705570292, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552114, Length=412, Percent_Identity=29.8543689320388, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17510559, Length=397, Percent_Identity=32.2418136020151, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI115532548, Length=411, Percent_Identity=31.6301703163017, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI115532546, Length=397, Percent_Identity=31.4861460957179, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17507879, Length=389, Percent_Identity=31.6195372750643, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71982858, Length=376, Percent_Identity=29.5212765957447, Blast_Score=198, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17507877, Length=389, Percent_Identity=32.3907455012853, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17507881, Length=396, Percent_Identity=32.0707070707071, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17509811, Length=373, Percent_Identity=31.3672922252011, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI193208216, Length=396, Percent_Identity=32.8282828282828, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=31.151832460733, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI193206561, Length=369, Percent_Identity=29.5392953929539, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17508543, Length=368, Percent_Identity=31.7934782608696, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17536103, Length=411, Percent_Identity=29.9270072992701, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17536101, Length=414, Percent_Identity=29.7101449275362, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536099, Length=409, Percent_Identity=30.0733496332518, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17505370, Length=380, Percent_Identity=28.1578947368421, Blast_Score=158, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17507641, Length=405, Percent_Identity=28.641975308642, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17553716, Length=386, Percent_Identity=27.2020725388601, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=29.3956043956044, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32564046, Length=392, Percent_Identity=29.0816326530612, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=28.698224852071, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71997889, Length=526, Percent_Identity=23.7642585551331, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148203, Length=437, Percent_Identity=23.5697940503432, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71982862, Length=233, Percent_Identity=29.1845493562232, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=46.6666666666667, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557982, Length=422, Percent_Identity=25.5924170616114, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25145561, Length=367, Percent_Identity=22.6158038147139, Blast_Score=76, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=40.0537634408602, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6324217, Length=372, Percent_Identity=39.247311827957, Blast_Score=259, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6323021, Length=388, Percent_Identity=38.659793814433, Blast_Score=258, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=374, Percent_Identity=39.572192513369, Blast_Score=257, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6321856, Length=388, Percent_Identity=37.3711340206186, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6320041, Length=398, Percent_Identity=32.9145728643216, Blast_Score=230, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=379, Percent_Identity=36.4116094986807, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=392, Percent_Identity=32.1428571428571, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6320449, Length=376, Percent_Identity=33.2446808510638, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6322912, Length=386, Percent_Identity=32.9015544041451, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=386, Percent_Identity=32.9015544041451, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=405, Percent_Identity=29.3827160493827, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=446, Percent_Identity=27.5784753363229, Blast_Score=193, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=382, Percent_Identity=31.6753926701571, Blast_Score=193, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=384, Percent_Identity=30.2083333333333, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321963, Length=401, Percent_Identity=33.9152119700748, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=373, Percent_Identity=32.9758713136729, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=404, Percent_Identity=30.4455445544554, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6323947, Length=369, Percent_Identity=32.520325203252, Blast_Score=183, Evalue=8e-47, Organism=Saccharomyces cerevisiae, GI6321267, Length=385, Percent_Identity=32.2077922077922, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=394, Percent_Identity=30.4568527918782, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319618, Length=428, Percent_Identity=27.1028037383178, Blast_Score=143, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6323306, Length=331, Percent_Identity=25.6797583081571, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=372, Percent_Identity=25, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322876, Length=207, Percent_Identity=29.951690821256, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24662330, Length=375, Percent_Identity=38.4, Blast_Score=262, Evalue=7e-70, Organism=Drosophila melanogaster, GI28574962, Length=380, Percent_Identity=38.4210526315789, Blast_Score=256, Evalue=4e-68, Organism=Drosophila melanogaster, GI24585582, Length=448, Percent_Identity=33.9285714285714, Blast_Score=254, Evalue=9e-68, Organism=Drosophila melanogaster, GI18857967, Length=527, Percent_Identity=33.5863377609108, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=38.8746803069054, Blast_Score=245, Evalue=8e-65, Organism=Drosophila melanogaster, GI21356161, Length=414, Percent_Identity=35.5072463768116, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI17977678, Length=373, Percent_Identity=36.4611260053619, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=36.4902506963788, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584399, Length=433, Percent_Identity=34.6420323325635, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=38.1578947368421, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=38.1578947368421, Blast_Score=240, Evalue=3e-63, Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=38.1578947368421, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=38.1578947368421, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=38.1578947368421, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=38.1578947368421, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=38.1578947368421, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24642151, Length=371, Percent_Identity=36.3881401617251, Blast_Score=238, Evalue=9e-63, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=34.6938775510204, Blast_Score=231, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583279, Length=461, Percent_Identity=31.4533622559653, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583281, Length=461, Percent_Identity=31.4533622559653, Blast_Score=230, Evalue=3e-60, Organism=Drosophila melanogaster, GI24645031, Length=387, Percent_Identity=32.8165374677003, Blast_Score=220, Evalue=3e-57, Organism=Drosophila melanogaster, GI28575014, Length=386, Percent_Identity=31.8652849740933, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI281365720, Length=336, Percent_Identity=36.6071428571429, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=33.3333333333333, Blast_Score=195, Evalue=9e-50, Organism=Drosophila melanogaster, GI17647335, Length=416, Percent_Identity=29.0865384615385, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI20130173, Length=476, Percent_Identity=30.672268907563, Blast_Score=185, Evalue=1e-46, Organism=Drosophila melanogaster, GI24582080, Length=386, Percent_Identity=30.8290155440415, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582078, Length=386, Percent_Identity=30.8290155440415, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136248, Length=386, Percent_Identity=30.8290155440415, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582075, Length=386, Percent_Identity=30.8290155440415, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24642822, Length=432, Percent_Identity=29.8611111111111, Blast_Score=175, Evalue=8e-44, Organism=Drosophila melanogaster, GI24581954, Length=378, Percent_Identity=29.6296296296296, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24581952, Length=378, Percent_Identity=29.6296296296296, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24581956, Length=378, Percent_Identity=29.6296296296296, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI18859659, Length=462, Percent_Identity=31.3852813852814, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI28571338, Length=462, Percent_Identity=31.3852813852814, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI28571808, Length=384, Percent_Identity=30.2083333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI28571809, Length=384, Percent_Identity=30.2083333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI24666101, Length=383, Percent_Identity=31.331592689295, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI21355559, Length=382, Percent_Identity=32.1989528795811, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24643725, Length=409, Percent_Identity=26.8948655256724, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=30.421686746988, Blast_Score=151, Evalue=2e-36, Organism=Drosophila melanogaster, GI19920478, Length=369, Percent_Identity=28.4552845528455, Blast_Score=130, Evalue=4e-30, Organism=Drosophila melanogaster, GI17136666, Length=445, Percent_Identity=25.3932584269663, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI24640164, Length=365, Percent_Identity=24.9315068493151, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 66643; Mature: 66512
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPQNGSGAIAHAESDTDTLIANAATQASAFAALGLDERIARALGELNYTQPTPVQAQA CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHH IPACLSGRDLLVTSQTGSGKTAAFMLPAIQRISEQPEPQRPRADGPQQRVKGRRPRPAPA HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC KPSLLVLTPTRELALQVTTATAQYGRHLRRIVCASILGGMPYPKQLDMLARMPDIIIATP CCCEEEEECCHHHEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECC GRLLDHIDSGRIDLSALDMLVFDEADRMLDMGFADDIEAIVGATPASRQMLMFSATMDRR HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEHHHHHHHH IEQLAERMMREPQRIEIAAARIDQSHIEERLHFTDDLSHKQQLLDHLLRDATLKQAIVFT HHHHHHHHHCCCHHEEHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEE ATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDVP ECCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEEEECHHHCCCCCC DITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRRIDATV CHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH VEGLEPKRSPKPRSGGPRAGGDRGGYRGNGGGNWRGQRDGYAARTGNGGNGGNSEGRFQR HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEH SFGGDRESFAPRRDDRGDRGTGYQGGQQRDWGNRDNAAPRQSYGQQTRNGDRFDPRQPRS HCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC QEGRSDWQQRPARGGYGNSNGNGSSYGNRDGAPRRFGDDNSNGAPRRSYGNSNGNSYGSK HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRSRDFDR CCCCCCCC >Mature Secondary Structure TQPQNGSGAIAHAESDTDTLIANAATQASAFAALGLDERIARALGELNYTQPTPVQAQA CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHH IPACLSGRDLLVTSQTGSGKTAAFMLPAIQRISEQPEPQRPRADGPQQRVKGRRPRPAPA HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC KPSLLVLTPTRELALQVTTATAQYGRHLRRIVCASILGGMPYPKQLDMLARMPDIIIATP CCCEEEEECCHHHEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECC GRLLDHIDSGRIDLSALDMLVFDEADRMLDMGFADDIEAIVGATPASRQMLMFSATMDRR HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEHHHHHHHH IEQLAERMMREPQRIEIAAARIDQSHIEERLHFTDDLSHKQQLLDHLLRDATLKQAIVFT HHHHHHHHHCCCHHEEHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEE ATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDVP ECCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEEEECHHHCCCCCC DITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRRIDATV CHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH VEGLEPKRSPKPRSGGPRAGGDRGGYRGNGGGNWRGQRDGYAARTGNGGNGGNSEGRFQR HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEH SFGGDRESFAPRRDDRGDRGTGYQGGQQRDWGNRDNAAPRQSYGQQTRNGDRFDPRQPRS HCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC QEGRSDWQQRPARGGYGNSNGNGSSYGNRDGAPRRFGDDNSNGAPRRSYGNSNGNSYGSK HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRSRDFDR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]