| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545604
Identifier: 17545604
GI number: 17545604
Start: 919162
End: 919500
Strand: Reverse
Name: 17545604
Synonym: RSc0885
Alternate gene names: NA
Gene position: 919500-919162 (Counterclockwise)
Preceding gene: 17545605
Following gene: 17545591
Centisome position: 24.74
GC content: 60.47
Gene sequence:
>339_bases GTGCGTAAGCAAAGCCAATCCCCGCAGACCCTCGCACTGGCCCACTTGTGCGAACTGGCACGACGACTGACGCCGGATGC CGCGAGAAACAGTAAACGCACAGTGCGCGCGAGCGCGGCGATTTTGCGCCAGTTGGAGACGACCAGCACACTGGTCTACA CAACGACCGAAGACGCGTGCGCGCGTCTGCTCAATGTCACTACCGGCCTCATCGGCATCCTGCAGTTGCTCGAGTTGTGG AGCGACCGCGCTTGGGAATGTCGATGCCTGCACTGTCTGCTGGTGCCGCTCAAGCTCGAACTCGATGACGCATTGAGCGA CATGCAGAAGATGCTGTAG
Upstream 100 bases:
>100_bases CCCAACACCTCTGCTTGCGTCAAGCAAGCTCTTTCCCCACCGCCACGTGCCACTCACCGTCCGCTACACGATGTTGTCGT CAGCCGGATGGAGGTAAAGG
Downstream 100 bases:
>100_bases CGCTCGGCATCCGATGGCTTGAAGAGAAAATCGTGGCCGGGGTAGCCCGGCCACACGGTTACTTACTCAAGGTGCCCAAG CACTTCGAGCCGTTGCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MRKQSQSPQTLALAHLCELARRLTPDAARNSKRTVRASAAILRQLETTSTLVYTTTEDACARLLNVTTGLIGILQLLELW SDRAWECRCLHCLLVPLKLELDDALSDMQKML
Sequences:
>Translated_112_residues MRKQSQSPQTLALAHLCELARRLTPDAARNSKRTVRASAAILRQLETTSTLVYTTTEDACARLLNVTTGLIGILQLLELW SDRAWECRCLHCLLVPLKLELDDALSDMQKML >Mature_112_residues MRKQSQSPQTLALAHLCELARRLTPDAARNSKRTVRASAAILRQLETTSTLVYTTTEDACARLLNVTTGLIGILQLLELW SDRAWECRCLHCLLVPLKLELDDALSDMQKML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12593; Mature: 12593
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQSQSPQTLALAHLCELARRLTPDAARNSKRTVRASAAILRQLETTSTLVYTTTEDAC CCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHH ARLLNVTTGLIGILQLLELWSDRAWECRCLHCLLVPLKLELDDALSDMQKML HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC >Mature Secondary Structure MRKQSQSPQTLALAHLCELARRLTPDAARNSKRTVRASAAILRQLETTSTLVYTTTEDAC CCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHH ARLLNVTTGLIGILQLLELWSDRAWECRCLHCLLVPLKLELDDALSDMQKML HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA