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The map label for this gene is popP2

Identifier: 17545587

GI number: 17545587

Start: 901192

End: 902373

Strand: Reverse

Name: popP2

Synonym: RSc0868

Alternate gene names: NA

Gene position: 902373-901192 (Counterclockwise)

Preceding gene: 17545590

Following gene: 17545586

Centisome position: 24.28

GC content: 58.63

Gene sequence:

>1182_bases
GTGGATCATCCTTTGCCGGGGCGCACGTGGTACGAGACCGGGCACACCACTGCATCGCTTGCTGATCGAACTTCCACCGC
ATCTGCGGCCCAGGTGGCCAGCTCGTCACGGAGTGCTGGTCCCGCAACAGCCGCAAGGCCCCAGCCCACGCGTACATCGG
CTGGCCAGCAAGCAACCGTGGGCCGGTTGCGGACTCAGGTCACGGGATTCCTCAGCGGCGCACTGGGAAAACTGCAAGCT
CTGAGCGCACAGAACATGGATCCAGAGTTGGCTCAATTCCGCGTTCTGGACGTGGACCGGGCGATCATGCCGCTGCTGAT
CGTTGCCGAAAACGCTCGCAATCCGGGACTCAATCTCGTGCCCCTGCATATGGATATGGCCGAAGACGAGGAGGTGCGCA
CCCAACCTCCAATGGCGGGGTCGCGACACATCGCTGAGTTCGTTGCGTCGGCCCGACCTGGACGGTACCGCGCGGTTATC
GACGACGGTTCTCACACCAGAGCCGCAGATATTCGCAAGGACGCCTCTGGTACGAGCGTGATCGTTGTCGATCCCCTCCG
AAAGGAAAAAGATGAAAGCGCGTACGTCGATTACGCCGACAACGTGAATATGGAATTCGGAGAGCATGCGAAATGCGCGT
TCATCCCGGTCGACATTCAGAAGTCCTTCTTCGATTGCCGGATACTCTCCCTGTCACTTGCACTCAAGATGCATGACAAG
GACGACGCGTTTGCCGCATTCCACGAGACGCTGAGAAATGGTGGCGATCCCTCACACCACGTGTCCCGCGCCCAACAGAC
GGAGGAACTTGGCGCTACCCTTGTGCTTGATGGTGCGCCACTGGTCGACGCCCGTATGATGAAACATGGTCAAGCCGCAA
GCTCTGTCTCTCGGTATCTCGGAAACCATCCCGAGCAGTCAACCGTACCTGTCAATAAGCGCAATGAAACCTTGGGCGAG
CGAACAACCCGCCATCTCGTCAAACGCAAGGTGCGCAACCGCGCTGATTCCGAAGGCCGCGTGACGAGCGGAGAAACGAA
GGAGATCACGTTCAGCAACTCCGTCGAGCAAAAGCGGATTGCGCTGCTTAACCGAGCCGCTTCCTATGTGAATTCAGCGC
CGCCGCCTGTTGTAATGCGTATGGCAAAACTGCTGCAGGATTCCCTATTGGATACCAACTGA

Upstream 100 bases:

>100_bases
CATGTTCCGCCGAGCTGGCATGACTTCGCTGCCGCCATCCCCGGCTACTTCTGAACATGTGCCACTCCTAGACAATCGGC
CGACGCTCGAACGGATGGGT

Downstream 100 bases:

>100_bases
AATCACGCTGGTCGGTCGGCGATTTTAAAAAATCGACAACAACTCACAAACCAGCTTCGGATTTGCCAAAGTGGCATTAG
AATTCCGGTGTCCGGGTCCA

Product: YOPP/AvrRxv family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MDHPLPGRTWYETGHTTASLADRTSTASAAQVASSSRSAGPATAARPQPTRTSAGQQATVGRLRTQVTGFLSGALGKLQA
LSAQNMDPELAQFRVLDVDRAIMPLLIVAENARNPGLNLVPLHMDMAEDEEVRTQPPMAGSRHIAEFVASARPGRYRAVI
DDGSHTRAADIRKDASGTSVIVVDPLRKEKDESAYVDYADNVNMEFGEHAKCAFIPVDIQKSFFDCRILSLSLALKMHDK
DDAFAAFHETLRNGGDPSHHVSRAQQTEELGATLVLDGAPLVDARMMKHGQAASSVSRYLGNHPEQSTVPVNKRNETLGE
RTTRHLVKRKVRNRADSEGRVTSGETKEITFSNSVEQKRIALLNRAASYVNSAPPPVVMRMAKLLQDSLLDTN

Sequences:

>Translated_393_residues
MDHPLPGRTWYETGHTTASLADRTSTASAAQVASSSRSAGPATAARPQPTRTSAGQQATVGRLRTQVTGFLSGALGKLQA
LSAQNMDPELAQFRVLDVDRAIMPLLIVAENARNPGLNLVPLHMDMAEDEEVRTQPPMAGSRHIAEFVASARPGRYRAVI
DDGSHTRAADIRKDASGTSVIVVDPLRKEKDESAYVDYADNVNMEFGEHAKCAFIPVDIQKSFFDCRILSLSLALKMHDK
DDAFAAFHETLRNGGDPSHHVSRAQQTEELGATLVLDGAPLVDARMMKHGQAASSVSRYLGNHPEQSTVPVNKRNETLGE
RTTRHLVKRKVRNRADSEGRVTSGETKEITFSNSVEQKRIALLNRAASYVNSAPPPVVMRMAKLLQDSLLDTN
>Mature_393_residues
MDHPLPGRTWYETGHTTASLADRTSTASAAQVASSSRSAGPATAARPQPTRTSAGQQATVGRLRTQVTGFLSGALGKLQA
LSAQNMDPELAQFRVLDVDRAIMPLLIVAENARNPGLNLVPLHMDMAEDEEVRTQPPMAGSRHIAEFVASARPGRYRAVI
DDGSHTRAADIRKDASGTSVIVVDPLRKEKDESAYVDYADNVNMEFGEHAKCAFIPVDIQKSFFDCRILSLSLALKMHDK
DDAFAAFHETLRNGGDPSHHVSRAQQTEELGATLVLDGAPLVDARMMKHGQAASSVSRYLGNHPEQSTVPVNKRNETLGE
RTTRHLVKRKVRNRADSEGRVTSGETKEITFSNSVEQKRIALLNRAASYVNSAPPPVVMRMAKLLQDSLLDTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42794; Mature: 42794

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHPLPGRTWYETGHTTASLADRTSTASAAQVASSSRSAGPATAARPQPTRTSAGQQATV
CCCCCCCCCEECCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
GRLRTQVTGFLSGALGKLQALSAQNMDPELAQFRVLDVDRAIMPLLIVAENARNPGLNLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEHHHHHHCEEEEECCCCCCCCEEE
PLHMDMAEDEEVRTQPPMAGSRHIAEFVASARPGRYRAVIDDGSHTRAADIRKDASGTSV
EEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCEE
IVVDPLRKEKDESAYVDYADNVNMEFGEHAKCAFIPVDIQKSFFDCRILSLSLALKMHDK
EEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHEEEEEEEEEECCC
DDAFAAFHETLRNGGDPSHHVSRAQQTEELGATLVLDGAPLVDARMMKHGQAASSVSRYL
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCHHHHHHHHH
GNHPEQSTVPVNKRNETLGERTTRHLVKRKVRNRADSEGRVTSGETKEITFSNSVEQKRI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHH
ALLNRAASYVNSAPPPVVMRMAKLLQDSLLDTN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDHPLPGRTWYETGHTTASLADRTSTASAAQVASSSRSAGPATAARPQPTRTSAGQQATV
CCCCCCCCCEECCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
GRLRTQVTGFLSGALGKLQALSAQNMDPELAQFRVLDVDRAIMPLLIVAENARNPGLNLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEHHHHHHCEEEEECCCCCCCCEEE
PLHMDMAEDEEVRTQPPMAGSRHIAEFVASARPGRYRAVIDDGSHTRAADIRKDASGTSV
EEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCEE
IVVDPLRKEKDESAYVDYADNVNMEFGEHAKCAFIPVDIQKSFFDCRILSLSLALKMHDK
EEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHEEEEEEEEEECCC
DDAFAAFHETLRNGGDPSHHVSRAQQTEELGATLVLDGAPLVDARMMKHGQAASSVSRYL
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCHHHHHHHHH
GNHPEQSTVPVNKRNETLGERTTRHLVKRKVRNRADSEGRVTSGETKEITFSNSVEQKRI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHH
ALLNRAASYVNSAPPPVVMRMAKLLQDSLLDTN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA