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The map label for this gene is 17545586

Identifier: 17545586

GI number: 17545586

Start: 900716

End: 901006

Strand: Reverse

Name: 17545586

Synonym: RSc0867

Alternate gene names: NA

Gene position: 901006-900716 (Counterclockwise)

Preceding gene: 17545587

Following gene: 17545570

Centisome position: 24.24

GC content: 63.57

Gene sequence:

>291_bases
ATGGCAACCTACAAAGACCTGCTTTCGCAAAAAGCAAAACTCGAAGAACAACTCGAAGCCGCTCGCCAGAAGGAACTGGC
TGAGATCACCGCGCAAGTGCGGCAGGTCGTGCAGGAATACGGCCTGACCGCCGAGGACATCGGCCTGGCGCCGAAGCGTG
GTGGCAAGCGCGCGCCCAAGGCGGCACCAGTGCCCAAGTACCGTGATCCCAAGACCGGCGCCACGTGGACCGGCCGCGGC
CGCGCCCCGGCCTGGATCGGCAAGAACCGCGACAAATATCTGATCGCCTGA

Upstream 100 bases:

>100_bases
CGGTGTCCGGGTCCACACGACTGATCGTGCTTTTTTGCATATGAGGCATGAGCGCTGGCCCGGTTATTTCCACAAGAACG
ATCTTTCCGGAAGAAACCAC

Downstream 100 bases:

>100_bases
TTCACCGGCAGGCGTCGCCTGCCGCCACGAGGCGCACACCGGTCAGCCCAACTGCCGGATGCGTGCCTCGATGGCGGTGG
TCAAGCGCGGAATGCGCCGC

Product: HNS-like transcription regulator protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Nucleoid Protein H-NS; Hns-Like Protein; H-NS-Like Proteins; HNS-Like Transcriptional Regulator; H-NS Histone-Like Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns; H-NS-Like Protein; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS-Like Transcription Regulator; HNS-Like Transcription Regulator Protein

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MATYKDLLSQKAKLEEQLEAARQKELAEITAQVRQVVQEYGLTAEDIGLAPKRGGKRAPKAAPVPKYRDPKTGATWTGRG
RAPAWIGKNRDKYLIA

Sequences:

>Translated_96_residues
MATYKDLLSQKAKLEEQLEAARQKELAEITAQVRQVVQEYGLTAEDIGLAPKRGGKRAPKAAPVPKYRDPKTGATWTGRG
RAPAWIGKNRDKYLIA
>Mature_95_residues
ATYKDLLSQKAKLEEQLEAARQKELAEITAQVRQVVQEYGLTAEDIGLAPKRGGKRAPKAAPVPKYRDPKTGATWTGRGR
APAWIGKNRDKYLIA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10634; Mature: 10503

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYKDLLSQKAKLEEQLEAARQKELAEITAQVRQVVQEYGLTAEDIGLAPKRGGKRAPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC
AAPVPKYRDPKTGATWTGRGRAPAWIGKNRDKYLIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
ATYKDLLSQKAKLEEQLEAARQKELAEITAQVRQVVQEYGLTAEDIGLAPKRGGKRAPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC
AAPVPKYRDPKTGATWTGRGRAPAWIGKNRDKYLIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA