| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545565
Identifier: 17545565
GI number: 17545565
Start: 887252
End: 887587
Strand: Reverse
Name: 17545565
Synonym: RSc0846
Alternate gene names: NA
Gene position: 887587-887252 (Counterclockwise)
Preceding gene: 17545566
Following gene: 17545548
Centisome position: 23.88
GC content: 65.18
Gene sequence:
>336_bases ATGCCGCCCGCGTTGCGGGTGGCGCTTGGCTTTGTCTGCTGCCAGCGCGTTACTACCGTCATCGCAACGGTCAACGCCAA GGAGCACACAATGCGCAACCTCAACCTTCCCCATACCCACGCATCCGAGCGCGAGCGGGCGCTGCGCTGGTTGATCCAGA ACCGCCGCCCGGACCTCTCCATCGAGCATGCCATCCGCCTGCTGAGCATGGTGTTGCCCCGCGATCGCCAGAGCCTGCTG CTGCTCAAACGCATTGCGGAGGAGCAGACAGCGGAACCGGCAGCCAAGACGCTGCTCAACTGGCGCACACCTCTCGGTCT GCCGCCTCGCGGATAG
Upstream 100 bases:
>100_bases CAGCGAAATCTACGGCATCCCGCGCGACCTGCCCCACCTGACGGCCTTTGTGGCCGCCAGCGAAATCGCCGACGAACTTT CGGCGTAAGTCCCCAACGGA
Downstream 100 bases:
>100_bases CCTGCTCCCCGGTGTATTCCTCCCAGCGCCTGACGATCACGTCGGCGTATTTGGGATCCAGTTCGATCAGGCGCGCAACG CGCGCCGCCTTTTCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPPALRVALGFVCCQRVTTVIATVNAKEHTMRNLNLPHTHASERERALRWLIQNRRPDLSIEHAIRLLSMVLPRDRQSLL LLKRIAEEQTAEPAAKTLLNWRTPLGLPPRG
Sequences:
>Translated_111_residues MPPALRVALGFVCCQRVTTVIATVNAKEHTMRNLNLPHTHASERERALRWLIQNRRPDLSIEHAIRLLSMVLPRDRQSLL LLKRIAEEQTAEPAAKTLLNWRTPLGLPPRG >Mature_110_residues PPALRVALGFVCCQRVTTVIATVNAKEHTMRNLNLPHTHASERERALRWLIQNRRPDLSIEHAIRLLSMVLPRDRQSLLL LKRIAEEQTAEPAAKTLLNWRTPLGLPPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12656; Mature: 12525
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPALRVALGFVCCQRVTTVIATVNAKEHTMRNLNLPHTHASERERALRWLIQNRRPDLS CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC IEHAIRLLSMVLPRDRQSLLLLKRIAEEQTAEPAAKTLLNWRTPLGLPPRG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PPALRVALGFVCCQRVTTVIATVNAKEHTMRNLNLPHTHASERERALRWLIQNRRPDLS CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC IEHAIRLLSMVLPRDRQSLLLLKRIAEEQTAEPAAKTLLNWRTPLGLPPRG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA