| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545517
Identifier: 17545517
GI number: 17545517
Start: 844216
End: 845361
Strand: Direct
Name: 17545517
Synonym: RSc0798
Alternate gene names: NA
Gene position: 844216-845361 (Clockwise)
Preceding gene: 17545516
Following gene: 17545518
Centisome position: 22.72
GC content: 69.81
Gene sequence:
>1146_bases GTGTTCCCGCTGTTCCCCAATCCCCAAACGAGGAGAACCATGAGCGTCCTATCCGAACAGGTCGACGGCCGGCCGCCGCA GCCGCCGTCTGGGCGGCGCGGCAAACGATGGCTCCGGGCCATCGCCGCCGGCGCGCTGCTGGCGGCCGGCGGCGGCGCGT CCACGCAGCCGGTCGCGCAGCAGGCGCCGCAGTCGCACGCGCGCAAGGTCAAGGTGCTGATCATCAGCATGTTCGCGCCC GAGGCCCAGCCGTGGATCGACAAGCTGGGCCTGACGCAGGCGGTGCCGGTGCCGGGCCTGTCGATCGACTACCCGAGCGT CCACTGCAACGCCAGCGACGTCTGCCAGCTGACCACCGGCATGGGCAAGGCCAATGCGGCATCGTCGGTGTCGGCACTGA TCCATAGCGGGCAGTTCGATCTGTCGCGCGCGTATTTCCTGGTGGCGGGCATCGCCGGCATCGATCCGTCGCAGGGCACG CTCGGCACGGCGGCGTGGGCGCGCTACCTGGTCGACAGCGATCTGGCCTGGGAGATCGACGCGCGCGAGGTTCCCGCCGA CTGGCCCAACGGCTTCATCGGCATCAATACGCAGGGGCCGGGGCAGAAGCCGCCGCTGAACTACAAGACGGAAATCTTCC GCGTGAACGAGGCGCTGCTGCAGAAGGCGCTGGCGCTCTCGAAGGGCGCCGTGCTGGACGACAACGCCACCGCGCGCGCC TACCGCGCCAACTACCCGAGCGCGCCGGCCAACCAGCCGCCCGCCGTCGTGCAGTGCGACACCGCGGCCGGCAATACGTA CTGGCACGGCGCGCTGCTCGGCCAGCGCGAAGCCGCCTGGGTCAAGCTGCTGACCGACGGGCAGGGCACGTACTGCACCA CCCAGCAGGAAGACAACGCCACCTTCGAGGCGCTGACGCGCGGATCGAAGGCCGGCCTGCTCGATCTGCAGCGCGTGGCC GTGCTGCGCACCGCCTCCAACTTCGACCGGCCGTATCCGGGGCAGACGCCGTACGACTCGCTGGTGGGCAGCAACTCGGG CGGCTTTGTGCCGTCGCTCAACAACCTCTATCTGGCGGGCGGCCCGCTGGTCAACGACATCGTCACGCGCTGGAGCGTGT GGAAACACGGAGTGCCCTCGCCATGA
Upstream 100 bases:
>100_bases CTCATGCTGGTGACAGGCCGCGCCGTCGCCTATACCGGGGAAGCGCGCGGGTGGCAGGCAATTTGCATGGGTGGCGCCCG CTGTTTTTGCAGTCCCTGCA
Downstream 100 bases:
>100_bases CCCATGCCCCGACCACGACGCCCCTGCGCACCGCCGCCAAGCTGCTCGCCGCCGGCGCGGCGGCGCTGACCCTGAACAGC TGCGCCTACGATGGCATCAA
Product: purine nucleoside permease
Products: NA
Alternate protein names: Purine Nucleoside Permease Protein; Purine Nucleoside Permease Family Protein; CNT Family Concentrative Nucleoside/H+ Anitporter; Purine Nucleoside Permease Family; Purine Nucleoside Permease-Like Protein; NUP-Family Purine Nucleoside Permease; Purine Nucleoside Transporter; Inosine/Uridine-Preferring Nucleoside Hydrolase; Lipoprotein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MFPLFPNPQTRRTMSVLSEQVDGRPPQPPSGRRGKRWLRAIAAGALLAAGGGASTQPVAQQAPQSHARKVKVLIISMFAP EAQPWIDKLGLTQAVPVPGLSIDYPSVHCNASDVCQLTTGMGKANAASSVSALIHSGQFDLSRAYFLVAGIAGIDPSQGT LGTAAWARYLVDSDLAWEIDAREVPADWPNGFIGINTQGPGQKPPLNYKTEIFRVNEALLQKALALSKGAVLDDNATARA YRANYPSAPANQPPAVVQCDTAAGNTYWHGALLGQREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSKAGLLDLQRVA VLRTASNFDRPYPGQTPYDSLVGSNSGGFVPSLNNLYLAGGPLVNDIVTRWSVWKHGVPSP
Sequences:
>Translated_381_residues MFPLFPNPQTRRTMSVLSEQVDGRPPQPPSGRRGKRWLRAIAAGALLAAGGGASTQPVAQQAPQSHARKVKVLIISMFAP EAQPWIDKLGLTQAVPVPGLSIDYPSVHCNASDVCQLTTGMGKANAASSVSALIHSGQFDLSRAYFLVAGIAGIDPSQGT LGTAAWARYLVDSDLAWEIDAREVPADWPNGFIGINTQGPGQKPPLNYKTEIFRVNEALLQKALALSKGAVLDDNATARA YRANYPSAPANQPPAVVQCDTAAGNTYWHGALLGQREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSKAGLLDLQRVA VLRTASNFDRPYPGQTPYDSLVGSNSGGFVPSLNNLYLAGGPLVNDIVTRWSVWKHGVPSP >Mature_381_residues MFPLFPNPQTRRTMSVLSEQVDGRPPQPPSGRRGKRWLRAIAAGALLAAGGGASTQPVAQQAPQSHARKVKVLIISMFAP EAQPWIDKLGLTQAVPVPGLSIDYPSVHCNASDVCQLTTGMGKANAASSVSALIHSGQFDLSRAYFLVAGIAGIDPSQGT LGTAAWARYLVDSDLAWEIDAREVPADWPNGFIGINTQGPGQKPPLNYKTEIFRVNEALLQKALALSKGAVLDDNATARA YRANYPSAPANQPPAVVQCDTAAGNTYWHGALLGQREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSKAGLLDLQRVA VLRTASNFDRPYPGQTPYDSLVGSNSGGFVPSLNNLYLAGGPLVNDIVTRWSVWKHGVPSP
Specific function: Unknown
COG id: COG5042
COG function: function code F; Purine nucleoside permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40582; Mature: 40582
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPLFPNPQTRRTMSVLSEQVDGRPPQPPSGRRGKRWLRAIAAGALLAAGGGASTQPVAQ CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHH QAPQSHARKVKVLIISMFAPEAQPWIDKLGLTQAVPVPGLSIDYPSVHCNASDVCQLTTG HCCHHHHCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHC MGKANAASSVSALIHSGQFDLSRAYFLVAGIAGIDPSQGTLGTAAWARYLVDSDLAWEID CCCCCHHHHHHHHHHCCCCCHHHHEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEC AREVPADWPNGFIGINTQGPGQKPPLNYKTEIFRVNEALLQKALALSKGAVLDDNATARA CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHCCCEECCCCCCEE YRANYPSAPANQPPAVVQCDTAAGNTYWHGALLGQREAAWVKLLTDGQGTYCTTQQEDNA EECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCC TFEALTRGSKAGLLDLQRVAVLRTASNFDRPYPGQTPYDSLVGSNSGGFVPSLNNLYLAG HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEC GPLVNDIVTRWSVWKHGVPSP CCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFPLFPNPQTRRTMSVLSEQVDGRPPQPPSGRRGKRWLRAIAAGALLAAGGGASTQPVAQ CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHH QAPQSHARKVKVLIISMFAPEAQPWIDKLGLTQAVPVPGLSIDYPSVHCNASDVCQLTTG HCCHHHHCEEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHC MGKANAASSVSALIHSGQFDLSRAYFLVAGIAGIDPSQGTLGTAAWARYLVDSDLAWEID CCCCCHHHHHHHHHHCCCCCHHHHEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEC AREVPADWPNGFIGINTQGPGQKPPLNYKTEIFRVNEALLQKALALSKGAVLDDNATARA CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHCCCEECCCCCCEE YRANYPSAPANQPPAVVQCDTAAGNTYWHGALLGQREAAWVKLLTDGQGTYCTTQQEDNA EECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCC TFEALTRGSKAGLLDLQRVAVLRTASNFDRPYPGQTPYDSLVGSNSGGFVPSLNNLYLAG HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEC GPLVNDIVTRWSVWKHGVPSP CCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA