Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yceI [C]

Identifier: 17545509

GI number: 17545509

Start: 834370

End: 834939

Strand: Reverse

Name: yceI [C]

Synonym: RSc0790

Alternate gene names: 17545509

Gene position: 834939-834370 (Counterclockwise)

Preceding gene: 17545510

Following gene: 17545508

Centisome position: 22.47

GC content: 65.26

Gene sequence:

>570_bases
ATGCGTGCATGGATCTGGATGCTGGCGGGGGGGCTGAGCACCTCCGCCCTTGCCGCGCCGTTCACGCCGGACCTGGCGCA
CACGGCGGTCTATTTCGGCGCATCGCATTTCGAGCGCACCACCCTGCGCGGCCGTTTCGACAAGATCGACGGCGCCATCG
ACTTCAACGAAGCGGACAACCAGGGTGGCTTCGATTTCACGATCGATGCCGCCTCGATCAACACCCGTCTGCCGGAACTG
GACGGCGTGCTGAAATCCGAGCAGTTCCTGGATGCCGCGCAGTTCCCGATCGTCCGCCTGCGCAGCGACCGCTTCGTCGT
GGAAGGCGGCAAGCTGGTCGCCGTGGAGGCCAGGCTGACGCTGCATGGCGTGACACAGCCGGTGCGCTTGGACGTGCGCC
GCTTCAATTGCGGCGATATCAAACTGATTGCCGCCACGCTGCACGTCTGCGGCGGCGATTTCCACCTCGCCATCCGGCGC
AGCGCGTTCGGCATGACGCGCTTCCTGCCGGAAGTCGGCGACCGCGTCGATCTGGAGATCAGCGTGGAAGCCTCGCCCAA
ACAACCTTGA

Upstream 100 bases:

>100_bases
CGGGCAAGCCCGTGTTCAACCGCGTGGTCGGCCTGAAGGACAGCTGGGGCAAGTAAGCACGGGCCCATGCTCGCCGTGGG
CCCCTGACCAAGGAGGCATC

Downstream 100 bases:

>100_bases
CCCTCACATGGCCAACATCGACTTCCAACTGACCTCCGACTACATCGAGCTGCACAAGCTGCTCAAGCTGACCGGCGTGG
TCGACAGCGGCGGCGCCGGC

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRAWIWMLAGGLSTSALAAPFTPDLAHTAVYFGASHFERTTLRGRFDKIDGAIDFNEADNQGGFDFTIDAASINTRLPEL
DGVLKSEQFLDAAQFPIVRLRSDRFVVEGGKLVAVEARLTLHGVTQPVRLDVRRFNCGDIKLIAATLHVCGGDFHLAIRR
SAFGMTRFLPEVGDRVDLEISVEASPKQP

Sequences:

>Translated_189_residues
MRAWIWMLAGGLSTSALAAPFTPDLAHTAVYFGASHFERTTLRGRFDKIDGAIDFNEADNQGGFDFTIDAASINTRLPEL
DGVLKSEQFLDAAQFPIVRLRSDRFVVEGGKLVAVEARLTLHGVTQPVRLDVRRFNCGDIKLIAATLHVCGGDFHLAIRR
SAFGMTRFLPEVGDRVDLEISVEASPKQP
>Mature_189_residues
MRAWIWMLAGGLSTSALAAPFTPDLAHTAVYFGASHFERTTLRGRFDKIDGAIDFNEADNQGGFDFTIDAASINTRLPEL
DGVLKSEQFLDAAQFPIVRLRSDRFVVEGGKLVAVEARLTLHGVTQPVRLDVRRFNCGDIKLIAATLHVCGGDFHLAIRR
SAFGMTRFLPEVGDRVDLEISVEASPKQP

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=173, Percent_Identity=30.635838150289, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 20773; Mature: 20773

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAWIWMLAGGLSTSALAAPFTPDLAHTAVYFGASHFERTTLRGRFDKIDGAIDFNEADN
CCEEEEEEECCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHCCCCHHCCCEEECCCCCC
QGGFDFTIDAASINTRLPELDGVLKSEQFLDAAQFPIVRLRSDRFVVEGGKLVAVEARLT
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCEEEEEEEEEE
LHGVTQPVRLDVRRFNCGDIKLIAATLHVCGGDFHLAIRRSAFGMTRFLPEVGDRVDLEI
EECCCCCEEEEEEECCCCCEEEEEEEHHHCCCCEEEEEEHHHHHHHHHHHHHCCEEEEEE
SVEASPKQP
EEECCCCCC
>Mature Secondary Structure
MRAWIWMLAGGLSTSALAAPFTPDLAHTAVYFGASHFERTTLRGRFDKIDGAIDFNEADN
CCEEEEEEECCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHCCCCHHCCCEEECCCCCC
QGGFDFTIDAASINTRLPELDGVLKSEQFLDAAQFPIVRLRSDRFVVEGGKLVAVEARLT
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCEEEEEEEEEE
LHGVTQPVRLDVRRFNCGDIKLIAATLHVCGGDFHLAIRRSAFGMTRFLPEVGDRVDLEI
EECCCCCEEEEEEECCCCCEEEEEEEHHHCCCCEEEEEEHHHHHHHHHHHHHCCEEEEEE
SVEASPKQP
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA