| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yaeQ [H]
Identifier: 17545504
GI number: 17545504
Start: 828729
End: 829277
Strand: Reverse
Name: yaeQ [H]
Synonym: RSc0785
Alternate gene names: 17545504
Gene position: 829277-828729 (Counterclockwise)
Preceding gene: 17545507
Following gene: 17545503
Centisome position: 22.31
GC content: 67.4
Gene sequence:
>549_bases ATGGCACTGAAATCCACGATCTACAAGGTCGATCTGCAGATCGCCGACATGGATCGCCACTACTACGGCAGCCACGCGCT GACCGTCGCCCGCCACCCGAGCGAGAACGACGAGCGCATGATGGTGCGCGTGCTCGCCTTCGCCCGGCACGCCAGCGAGA CGCTCGCCTTCACGCGCGGCCTCTCCGAGCCCGACGAACCCGACCTGTGGCAGCGCGACCTGACCGACGCCGTGGAACTG TGGATCGACCTGGGCAATCCGGACGAGACGCGCATCCGCAAGGCATGCAACCGCTCGCAGCAAGTGGCCGTGTACACCCA CAGCGGCAACGCCACGCGCGTGTGGTGGCAGCAGACCGGAACCAAGGTGGCGCGCTTCGCCAACCTGTCGGTCTATGAAG TCGCGCCCGACACCGTGGCCGCGCTCGCCGCGCTGGTAGAGCGCTCGATGCGGCTGCAGGTCACCATCCAGGACGGCGAC ATCTGGATCGCCGACGACGCGGACAACATCCAGGTCCGGCTCGATACGCTCAAGGCCGCCGGCGCCTGA
Upstream 100 bases:
>100_bases AATGGGAATGCACCAAAGTACAGAAGCGTGCGATGCGTGTCACCGGCCCGTGCGACAATGCGCGCTCCGTTGAACAACCC CTGCCCCCAGACCTGTCCGC
Downstream 100 bases:
>100_bases GCCCCTCTCTCTCAACCTTTCCCACACGAGGCTCACCATGACCATCACCACCACCCAGAGCGGCCTGCAATACGAAGACG TCACCGTGGGCGACGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MALKSTIYKVDLQIADMDRHYYGSHALTVARHPSENDERMMVRVLAFARHASETLAFTRGLSEPDEPDLWQRDLTDAVEL WIDLGNPDETRIRKACNRSQQVAVYTHSGNATRVWWQQTGTKVARFANLSVYEVAPDTVAALAALVERSMRLQVTIQDGD IWIADDADNIQVRLDTLKAAGA
Sequences:
>Translated_182_residues MALKSTIYKVDLQIADMDRHYYGSHALTVARHPSENDERMMVRVLAFARHASETLAFTRGLSEPDEPDLWQRDLTDAVEL WIDLGNPDETRIRKACNRSQQVAVYTHSGNATRVWWQQTGTKVARFANLSVYEVAPDTVAALAALVERSMRLQVTIQDGD IWIADDADNIQVRLDTLKAAGA >Mature_181_residues ALKSTIYKVDLQIADMDRHYYGSHALTVARHPSENDERMMVRVLAFARHASETLAFTRGLSEPDEPDLWQRDLTDAVELW IDLGNPDETRIRKACNRSQQVAVYTHSGNATRVWWQQTGTKVARFANLSVYEVAPDTVAALAALVERSMRLQVTIQDGDI WIADDADNIQVRLDTLKAAGA
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=174, Percent_Identity=49.4252873563218, Blast_Score=191, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20483; Mature: 20352
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKSTIYKVDLQIADMDRHYYGSHALTVARHPSENDERMMVRVLAFARHASETLAFTRG CCCCCCEEEEEEEEEECCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC LSEPDEPDLWQRDLTDAVELWIDLGNPDETRIRKACNRSQQVAVYTHSGNATRVWWQQTG CCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCEEEEEEECCCEEEEEEECCC TKVARFANLSVYEVAPDTVAALAALVERSMRLQVTIQDGDIWIADDADNIQVRLDTLKAA CHHHHHHCCEEEEECCHHHHHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEEEEEECCC GA CC >Mature Secondary Structure ALKSTIYKVDLQIADMDRHYYGSHALTVARHPSENDERMMVRVLAFARHASETLAFTRG CCCCCEEEEEEEEEECCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC LSEPDEPDLWQRDLTDAVELWIDLGNPDETRIRKACNRSQQVAVYTHSGNATRVWWQQTG CCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCEEEEEEECCCEEEEEEECCC TKVARFANLSVYEVAPDTVAALAALVERSMRLQVTIQDGDIWIADDADNIQVRLDTLKAA CHHHHHHCCEEEEECCHHHHHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEEEEEECCC GA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]