| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545497
Identifier: 17545497
GI number: 17545497
Start: 822815
End: 823480
Strand: Reverse
Name: 17545497
Synonym: RSc0778
Alternate gene names: NA
Gene position: 823480-822815 (Counterclockwise)
Preceding gene: 17545498
Following gene: 17545496
Centisome position: 22.16
GC content: 71.47
Gene sequence:
>666_bases ATGCGACTGATCTACGTTGCCGATCCGATGTGCTCGTGGTGCTACGGCTTCGGCCCGCAGCTGGCGGACCTGCGCGCGCG GCTGGCCGACACGCTGGGCGCGCCGGTGCCGGTCACCCTCGTCACCGGCGGCCTGCGTCCGGGCCAGCGCGAGCCGCTGC CCGCGGCCAAGCGCGAGGAGATCCTGCACCACTGGCACGCCGTGGCCGAGCGCAGCGGCGTGCCGTTCAGCCACGCGCCC GACGCGGCCATGCGCCGGGAGGGCTTCGTCTACGACACCGAGCCCGCCTGCCGCGTCGTGGTGATGGCGCGCGAATACTG GGACGAAACGGACGAGCGCGTGCTCACCTGCTTCCATGCGATTCAGCATGCCTTCTACGCCGAAGGCCGCGACACCACGC GCACCGAGGTGCTGCGCGAGATCGCCATCGCCGGCGGCCTGGCGGCGGACCATGTCGACACGGTGTTCGACTCCGAAGCG CTACGCAACGAAACGCGGGAAGACTTCCGCCTGGCACGCCGCTGGGGAATCACGGGCTTCCCCAGCCTGCTGGCCGAACA GGCCGGCACGCTGTACCAGATCGGACGCGGCTACGCGCCATCGGTGGCGCTGTACGCACGCGCCGTGGAAGTGCTGGCGC AGCACCCGGCGCCCGACGCCGGCTAA
Upstream 100 bases:
>100_bases GCCGCAAGACCATGGTCTCGGTATTCGATCTGATGCGCGACCCGCAGGCGGTCTCGCTCTGGCGCCGTCAGTTGGCGTCC AGGTTGAACTGAGGCTGCCG
Downstream 100 bases:
>100_bases CGGATTTGCCTCGCGTCAAACGGCATGGCGGGGGGCGTCCGCTAATCTGACGGCCTTGTCCACGCTGTTTGCTTATCACC CGTCATGCCCGTGATCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin; Thioredoxin Domain-Containing Protein; Dsba Oxidoreductase; Thioredoxin-Like Fold; Dithiol-Disulfide Isomerase; DsbA FrnE Like Protein; Protein-Disulfide Isomerase-Like Protein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRLIYVADPMCSWCYGFGPQLADLRARLADTLGAPVPVTLVTGGLRPGQREPLPAAKREEILHHWHAVAERSGVPFSHAP DAAMRREGFVYDTEPACRVVVMAREYWDETDERVLTCFHAIQHAFYAEGRDTTRTEVLREIAIAGGLAADHVDTVFDSEA LRNETREDFRLARRWGITGFPSLLAEQAGTLYQIGRGYAPSVALYARAVEVLAQHPAPDAG
Sequences:
>Translated_221_residues MRLIYVADPMCSWCYGFGPQLADLRARLADTLGAPVPVTLVTGGLRPGQREPLPAAKREEILHHWHAVAERSGVPFSHAP DAAMRREGFVYDTEPACRVVVMAREYWDETDERVLTCFHAIQHAFYAEGRDTTRTEVLREIAIAGGLAADHVDTVFDSEA LRNETREDFRLARRWGITGFPSLLAEQAGTLYQIGRGYAPSVALYARAVEVLAQHPAPDAG >Mature_221_residues MRLIYVADPMCSWCYGFGPQLADLRARLADTLGAPVPVTLVTGGLRPGQREPLPAAKREEILHHWHAVAERSGVPFSHAP DAAMRREGFVYDTEPACRVVVMAREYWDETDERVLTCFHAIQHAFYAEGRDTTRTEVLREIAIAGGLAADHVDTVFDSEA LRNETREDFRLARRWGITGFPSLLAEQAGTLYQIGRGYAPSVALYARAVEVLAQHPAPDAG
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24487; Mature: 24487
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIYVADPMCSWCYGFGPQLADLRARLADTLGAPVPVTLVTGGLRPGQREPLPAAKREE CEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH ILHHWHAVAERSGVPFSHAPDAAMRREGFVYDTEPACRVVVMAREYWDETDERVLTCFHA HHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH IQHAFYAEGRDTTRTEVLREIAIAGGLAADHVDTVFDSEALRNETREDFRLARRWGITGF HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH PSLLAEQAGTLYQIGRGYAPSVALYARAVEVLAQHPAPDAG HHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLIYVADPMCSWCYGFGPQLADLRARLADTLGAPVPVTLVTGGLRPGQREPLPAAKREE CEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH ILHHWHAVAERSGVPFSHAPDAAMRREGFVYDTEPACRVVVMAREYWDETDERVLTCFHA HHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH IQHAFYAEGRDTTRTEVLREIAIAGGLAADHVDTVFDSEALRNETREDFRLARRWGITGF HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH PSLLAEQAGTLYQIGRGYAPSVALYARAVEVLAQHPAPDAG HHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA