| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is katGb [H]
Identifier: 17545494
GI number: 17545494
Start: 819890
End: 821257
Strand: Reverse
Name: katGb [H]
Synonym: RSc0775
Alternate gene names: 17545494
Gene position: 821257-819890 (Counterclockwise)
Preceding gene: 17545495
Following gene: 17545492
Centisome position: 22.1
GC content: 67.69
Gene sequence:
>1368_bases GTGGGGCCGGAGCCGGAAGCGGCCGGCATCGAAGAACAGGGCCTGGGCTGGAGCAGCCGCTTCGGCACCGGCAAGGGCAC CGACGCCATCACCAGCGGCCTGGAAGTGACCTGGACCACCACGCCCACGCAGTGGAGCAACAACTTCTTCCAGAACCTGT TCGGCTACGAGTGGGAACTGACCAAGAGCCCGGCCGGCGCGCACCAGTGGGTCGCCAAGGACGCCGCCGAGACCATTCCG GATGCGCACGACCCGTCCGCGAAGCATCTGCCGACGATGCTGACCACCGACCTGTCCCTGCGCTTCGACCCCGCCTACGA GAAGATCTCACGGCGCTTCTACGAGCATCCGGAGCAGTTCGCCGACGCGTTCGCGCGGGCGTGGTTCAAGCTGACCCACC GCGACATGGGCCCGCGCGCGCGCTATCTCGGCCCGGAAGTACCGGCCGAAGCGCTCATCTGGCAAGACCCGATCCCGGCC GTGGATCACAAGCTGATCGACACGCAGGACATTGCCGCCCTCAAGGCCAGGATCCTGGCTTCGGGGCTGTCGGTCTCGCA ACTGGTCTCGACCGCCTGGGCATCGGCGTCCACCTTCCGCGGCTCGGACATGCGCGGCGGTGCCAACGGCGCGCGCATCC GTCTCGCGCCGCAGAAGGATTGGGAAGCCAACCAGCCGGCCCAGCTGGCCAAGGTGCTGGAGACGCTCGAGAGCATCCAG GGCGCGTTCAACGGCGCGCAGTCTGGTGGCAAGAAGGTCTCGCTCGCCGACCTGATCGTGCTGGCCGGTTGTGCCGGCGT CGAACAGGCAGCGAAGAACGCCGGCCATGCGGTGGAGGTGCCCTTCACGCCGGGGCGCATGGATGCCGCGCAGGCGCAGA CCGATGTGGAATCCTTCGCCGTGCTCGAGCCGATCGCGGACGGCTTCCGCAACTACCAGAAGGGCAAGTACACCCTGCCG GCCGAGGCCCTGCTGGTCGACAAGGCGCAATTGCTGACGCTGACCGCGCCGGAGATGACGGTGCTCGTGGGCGGCCTGCG CGTGCTCGACACGAACATCGGGCAGACCCGCCACGGTGTCTTCACCCAGCGGCCGGAATCGCTGACCAACGACTTCTTCG TGAACCTGCTCGACATGGGCACGGAGTGGAAGGCGACGGACGGACGGGACGTGTTCGAAGGGCGCGACCGCGCAACCGGC GCACTCAAGTGGACCGGCACCCGGGTCGATCTCGTCTTCGGCTCGCACTCGCAGCTCCGTGCCCTGGCCGAGGTCTACGG CAGCGCCGACGCGCAGGCGAAGTTTGTCCGTGACTTCGTCGCGGCCTGGGACAAGGTGATGAACCTCGACCGCTTCGATC TCGCGTAA
Upstream 100 bases:
>100_bases AGACGTTCGCCCGCATGGCGATGAACGATGAAGAGACGGTCGCGCTGATCGCGGGCGGCCACTCCTTCGGCAAGACCCAC GGGGCCGGTCCGGCTCCAAC
Downstream 100 bases:
>100_bases TCACGAAAGGGCGGCCTCAAGGTCTTGAGGCCGCGTGCAGCCACGGGAACGGCCGGTCGCAGGATCGGCCGTTCCCATTT TCCGGCCGACACCGACAGCA
Product: peroxidase/catalase oxidoreductase
Products: NA
Alternate protein names: CP; Peroxidase/catalase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MGPEPEAAGIEEQGLGWSSRFGTGKGTDAITSGLEVTWTTTPTQWSNNFFQNLFGYEWELTKSPAGAHQWVAKDAAETIP DAHDPSAKHLPTMLTTDLSLRFDPAYEKISRRFYEHPEQFADAFARAWFKLTHRDMGPRARYLGPEVPAEALIWQDPIPA VDHKLIDTQDIAALKARILASGLSVSQLVSTAWASASTFRGSDMRGGANGARIRLAPQKDWEANQPAQLAKVLETLESIQ GAFNGAQSGGKKVSLADLIVLAGCAGVEQAAKNAGHAVEVPFTPGRMDAAQAQTDVESFAVLEPIADGFRNYQKGKYTLP AEALLVDKAQLLTLTAPEMTVLVGGLRVLDTNIGQTRHGVFTQRPESLTNDFFVNLLDMGTEWKATDGRDVFEGRDRATG ALKWTGTRVDLVFGSHSQLRALAEVYGSADAQAKFVRDFVAAWDKVMNLDRFDLA
Sequences:
>Translated_455_residues MGPEPEAAGIEEQGLGWSSRFGTGKGTDAITSGLEVTWTTTPTQWSNNFFQNLFGYEWELTKSPAGAHQWVAKDAAETIP DAHDPSAKHLPTMLTTDLSLRFDPAYEKISRRFYEHPEQFADAFARAWFKLTHRDMGPRARYLGPEVPAEALIWQDPIPA VDHKLIDTQDIAALKARILASGLSVSQLVSTAWASASTFRGSDMRGGANGARIRLAPQKDWEANQPAQLAKVLETLESIQ GAFNGAQSGGKKVSLADLIVLAGCAGVEQAAKNAGHAVEVPFTPGRMDAAQAQTDVESFAVLEPIADGFRNYQKGKYTLP AEALLVDKAQLLTLTAPEMTVLVGGLRVLDTNIGQTRHGVFTQRPESLTNDFFVNLLDMGTEWKATDGRDVFEGRDRATG ALKWTGTRVDLVFGSHSQLRALAEVYGSADAQAKFVRDFVAAWDKVMNLDRFDLA >Mature_454_residues GPEPEAAGIEEQGLGWSSRFGTGKGTDAITSGLEVTWTTTPTQWSNNFFQNLFGYEWELTKSPAGAHQWVAKDAAETIPD AHDPSAKHLPTMLTTDLSLRFDPAYEKISRRFYEHPEQFADAFARAWFKLTHRDMGPRARYLGPEVPAEALIWQDPIPAV DHKLIDTQDIAALKARILASGLSVSQLVSTAWASASTFRGSDMRGGANGARIRLAPQKDWEANQPAQLAKVLETLESIQG AFNGAQSGGKKVSLADLIVLAGCAGVEQAAKNAGHAVEVPFTPGRMDAAQAQTDVESFAVLEPIADGFRNYQKGKYTLPA EALLVDKAQLLTLTAPEMTVLVGGLRVLDTNIGQTRHGVFTQRPESLTNDFFVNLLDMGTEWKATDGRDVFEGRDRATGA LKWTGTRVDLVFGSHSQLRALAEVYGSADAQAKFVRDFVAAWDKVMNLDRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=455, Percent_Identity=65.2747252747253, Blast_Score=577, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 49594; Mature: 49463
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPEPEAAGIEEQGLGWSSRFGTGKGTDAITSGLEVTWTTTPTQWSNNFFQNLFGYEWEL CCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEE TKSPAGAHQWVAKDAAETIPDAHDPSAKHLPTMLTTDLSLRFDPAYEKISRRFYEHPEQF CCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCCCEEEECHHHHHHHHHHHHCHHHH ADAFARAWFKLTHRDMGPRARYLGPEVPAEALIWQDPIPAVDHKLIDTQDIAALKARILA HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHEEECCCCCHHHHHHCCHHHHHHHHHHHHH SGLSVSQLVSTAWASASTFRGSDMRGGANGARIRLAPQKDWEANQPAQLAKVLETLESIQ CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH GAFNGAQSGGKKVSLADLIVLAGCAGVEQAAKNAGHAVEVPFTPGRMDAAQAQTDVESFA HHHCCCCCCCCEEHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH VLEPIADGFRNYQKGKYTLPAEALLVDKAQLLTLTAPEMTVLVGGLRVLDTNIGQTRHGV HHHHHHHHHHHHCCCCEECCHHHHHHCCHHEEEEECCHHHHHHCCHHEEECCCCCCCCCC FTQRPESLTNDFFVNLLDMGTEWKATDGRDVFEGRDRATGALKWTGTRVDLVFGSHSQLR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEECCCEEEEEECCHHHHH ALAEVYGSADAQAKFVRDFVAAWDKVMNLDRFDLA HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure GPEPEAAGIEEQGLGWSSRFGTGKGTDAITSGLEVTWTTTPTQWSNNFFQNLFGYEWEL CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEE TKSPAGAHQWVAKDAAETIPDAHDPSAKHLPTMLTTDLSLRFDPAYEKISRRFYEHPEQF CCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCCCEEEECHHHHHHHHHHHHCHHHH ADAFARAWFKLTHRDMGPRARYLGPEVPAEALIWQDPIPAVDHKLIDTQDIAALKARILA HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHEEECCCCCHHHHHHCCHHHHHHHHHHHHH SGLSVSQLVSTAWASASTFRGSDMRGGANGARIRLAPQKDWEANQPAQLAKVLETLESIQ CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH GAFNGAQSGGKKVSLADLIVLAGCAGVEQAAKNAGHAVEVPFTPGRMDAAQAQTDVESFA HHHCCCCCCCCEEHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH VLEPIADGFRNYQKGKYTLPAEALLVDKAQLLTLTAPEMTVLVGGLRVLDTNIGQTRHGV HHHHHHHHHHHHCCCCEECCHHHHHHCCHHEEEEECCHHHHHHCCHHEEECCCCCCCCCC FTQRPESLTNDFFVNLLDMGTEWKATDGRDVFEGRDRATGALKWTGTRVDLVFGSHSQLR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEECCCEEEEEECCHHHHH ALAEVYGSADAQAKFVRDFVAAWDKVMNLDRFDLA HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]