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The map label for this gene is ygdL [H]

Identifier: 17545493

GI number: 17545493

Start: 818883

End: 819785

Strand: Direct

Name: ygdL [H]

Synonym: RSc0774

Alternate gene names: 17545493

Gene position: 818883-819785 (Clockwise)

Preceding gene: 17545491

Following gene: 17545499

Centisome position: 22.03

GC content: 70.76

Gene sequence:

>903_bases
ATGAGTCACGTAGCAATCAGCGCGCCCGCGCATCCGCCCGCCCTGGATGACGAATACGCCCGCCGCTTCGGCGGTGTCGC
ACGGCTGTATGGCCCGCAAGCGCTGGAGCGCTTCGCTGCGGCGCACATCTGCGTGATCGGCGTCGGCGGCGTCGGCTCGT
GGGTGGCCGAAGCGCTCGCGCGGTGCGGCATCGGCAGGCTGACGCTGATCGACCTCGATCACATCGCGGTCTCCAACACC
AACCGCCAGATCCACGCGCTGGGTGACGCCTACGGCAAGGCCAAGGTCGACGCGATGGCCGAGCGCATCGCCGAGATCAA
CCCGCGCGCCGAGATCAGCCGCATCGACGATTTCGTCACCGTGGAGAACGTCGATGCGCTGCTCGGCCATCCGTTCGACT
ACGTGGTCGATGCCATCGACGCGGTCAAGGTCAAGACCGCCATCGTGGCCTTCTGCCAGCGCACCGGCACGCGCGTGGTG
ACTTGCGGCGCGGCCGGCGGGCAACTGGATCCGACGCGCATCCGCGTGGCCGATCTCGCGCGCACCATCCAGGACCCGCT
GCTTGCCAAGGTGCGCGGCAACCTGCGCCGCCAGCACGGCTTCCCGCGCGATCCGAAGGCGCGCTTCGGCATCGATGCGG
TGTATTCGGACGAGCCGCTGCGCTATCCGGAGCCGGAGCAGCAGGCCTGCGCGGTGGAGGTGCCGGCCGAATCGAGCCAC
GCGGGCATCGATGACCTGGCGGCGGCGGGGGCGATCGAGGTGGTCAACGCACCGCCGGCGCCGCAGCCCTCGCGCGGGCC
GCAGGGGCTGGCTTGCGCGGGCTTCGGTTCGTCCGTCTGCGTGACGGCGGTGTTCGGCATGGTGGCGGCGTCGACGGCCC
TGCGCGCGATCGCGGCCGTGTGA

Upstream 100 bases:

>100_bases
GCGTTCTTGTCGGCGAGGCTTCTTATTGGCGGCGTGGCACGGGGTTTCGGACCGGGCCCGTTGTTATATAGTTCGGCGCA
GTCCCGAAATCCATTGTGTC

Downstream 100 bases:

>100_bases
TGCCTGCTGTCGGTGTCGGCCGGAAAATGGGAACGGCCGATCCTGCGACCGGCCGTTCCCGTGGCTGCACGCGGCCTCAA
GACCTTGAGGCCGCCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSHVAISAPAHPPALDDEYARRFGGVARLYGPQALERFAAAHICVIGVGGVGSWVAEALARCGIGRLTLIDLDHIAVSNT
NRQIHALGDAYGKAKVDAMAERIAEINPRAEISRIDDFVTVENVDALLGHPFDYVVDAIDAVKVKTAIVAFCQRTGTRVV
TCGAAGGQLDPTRIRVADLARTIQDPLLAKVRGNLRRQHGFPRDPKARFGIDAVYSDEPLRYPEPEQQACAVEVPAESSH
AGIDDLAAAGAIEVVNAPPAPQPSRGPQGLACAGFGSSVCVTAVFGMVAASTALRAIAAV

Sequences:

>Translated_300_residues
MSHVAISAPAHPPALDDEYARRFGGVARLYGPQALERFAAAHICVIGVGGVGSWVAEALARCGIGRLTLIDLDHIAVSNT
NRQIHALGDAYGKAKVDAMAERIAEINPRAEISRIDDFVTVENVDALLGHPFDYVVDAIDAVKVKTAIVAFCQRTGTRVV
TCGAAGGQLDPTRIRVADLARTIQDPLLAKVRGNLRRQHGFPRDPKARFGIDAVYSDEPLRYPEPEQQACAVEVPAESSH
AGIDDLAAAGAIEVVNAPPAPQPSRGPQGLACAGFGSSVCVTAVFGMVAASTALRAIAAV
>Mature_299_residues
SHVAISAPAHPPALDDEYARRFGGVARLYGPQALERFAAAHICVIGVGGVGSWVAEALARCGIGRLTLIDLDHIAVSNTN
RQIHALGDAYGKAKVDAMAERIAEINPRAEISRIDDFVTVENVDALLGHPFDYVVDAIDAVKVKTAIVAFCQRTGTRVVT
CGAAGGQLDPTRIRVADLARTIQDPLLAKVRGNLRRQHGFPRDPKARFGIDAVYSDEPLRYPEPEQQACAVEVPAESSHA
GIDDLAAAGAIEVVNAPPAPQPSRGPQGLACAGFGSSVCVTAVFGMVAASTALRAIAAV

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=286, Percent_Identity=48.2517482517483, Blast_Score=273, Evalue=9e-75,
Organism=Escherichia coli, GI1787048, Length=140, Percent_Identity=27.8571428571429, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082356, Length=136, Percent_Identity=28.6764705882353, Blast_Score=61, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322825, Length=244, Percent_Identity=30.7377049180328, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321790, Length=217, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24660640, Length=144, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641311, Length=155, Percent_Identity=33.5483870967742, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 31484; Mature: 31353

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVAISAPAHPPALDDEYARRFGGVARLYGPQALERFAAAHICVIGVGGVGSWVAEALA
CCCEEECCCCCCCCCCHHHHHHHCCHHHHCCHHHHHHHHHHEEEEEECCCHHHHHHHHHH
RCGIGRLTLIDLDHIAVSNTNRQIHALGDAYGKAKVDAMAERIAEINPRAEISRIDDFVT
HCCCCCEEEEEECCEEECCCCCEEEEHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VENVDALLGHPFDYVVDAIDAVKVKTAIVAFCQRTGTRVVTCGAAGGQLDPTRIRVADLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
RTIQDPLLAKVRGNLRRQHGFPRDPKARFGIDAVYSDEPLRYPEPEQQACAVEVPAESSH
HHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCCC
AGIDDLAAAGAIEVVNAPPAPQPSRGPQGLACAGFGSSVCVTAVFGMVAASTALRAIAAV
CCHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHVAISAPAHPPALDDEYARRFGGVARLYGPQALERFAAAHICVIGVGGVGSWVAEALA
CCEEECCCCCCCCCCHHHHHHHCCHHHHCCHHHHHHHHHHEEEEEECCCHHHHHHHHHH
RCGIGRLTLIDLDHIAVSNTNRQIHALGDAYGKAKVDAMAERIAEINPRAEISRIDDFVT
HCCCCCEEEEEECCEEECCCCCEEEEHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VENVDALLGHPFDYVVDAIDAVKVKTAIVAFCQRTGTRVVTCGAAGGQLDPTRIRVADLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH
RTIQDPLLAKVRGNLRRQHGFPRDPKARFGIDAVYSDEPLRYPEPEQQACAVEVPAESSH
HHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCEEEECCCCCCC
AGIDDLAAAGAIEVVNAPPAPQPSRGPQGLACAGFGSSVCVTAVFGMVAASTALRAIAAV
CCHHHHHHCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]