| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545471
Identifier: 17545471
GI number: 17545471
Start: 795870
End: 796247
Strand: Reverse
Name: 17545471
Synonym: RSc0752
Alternate gene names: NA
Gene position: 796247-795870 (Counterclockwise)
Preceding gene: 17545472
Following gene: 17545470
Centisome position: 21.43
GC content: 65.61
Gene sequence:
>378_bases ATGACCGACGATCACAGCCCCAAGCTGCTTGCTTCGCTGAAAAAACTGGCCGGTACGGTCGTCTCGATGGCGCAGACGCG CCTCGAACTCGCCAGCGTCGAACTGGCCGAGGAAAAAGAGCGCCTGCTCGGTGCCGCCTTTCTCGGCATGCTGGCGGTCA GCCTGATCGGGCTGGCCATCATGACGCTCACCGCGCTCATCGCCATCCTGTTCTGGGACACCTACCGCTGGCAATCGCTG GCCGTCATGGCGGCGCTGTACGCGCTCGGCGCCGCGGCCTGCCTGTGGAAAGTCCGCATGTCGCTGCGCAGCGCGCCGCC CCTGTTCGAGGCGACGCTGGCCGAACTCGATAAAGACCGGGAGATCCTGCGCCGATGA
Upstream 100 bases:
>100_bases GGCCGAAACGACGGACGCGGCCGCAGCGCGATCGCCAGCCCCGTGCCGGCGCTCCGGACGGGGCAGGTTTGCCCCGGGCC CCCGTCATCCCGGAAACTTC
Downstream 100 bases:
>100_bases CCGCGCCGAACCGAACGGGCGACGTGCCCGACCACGAAGCCGCGCACACCGCGCGCCACCATGTCCGCCCGTCCCGCCGA CGCGGCGAAGCGCGGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTDDHSPKLLASLKKLAGTVVSMAQTRLELASVELAEEKERLLGAAFLGMLAVSLIGLAIMTLTALIAILFWDTYRWQSL AVMAALYALGAAACLWKVRMSLRSAPPLFEATLAELDKDREILRR
Sequences:
>Translated_125_residues MTDDHSPKLLASLKKLAGTVVSMAQTRLELASVELAEEKERLLGAAFLGMLAVSLIGLAIMTLTALIAILFWDTYRWQSL AVMAALYALGAAACLWKVRMSLRSAPPLFEATLAELDKDREILRR >Mature_124_residues TDDHSPKLLASLKKLAGTVVSMAQTRLELASVELAEEKERLLGAAFLGMLAVSLIGLAIMTLTALIAILFWDTYRWQSLA VMAALYALGAAACLWKVRMSLRSAPPLFEATLAELDKDREILRR
Specific function: Unknown
COG id: COG5393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13719; Mature: 13587
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDHSPKLLASLKKLAGTVVSMAQTRLELASVELAEEKERLLGAAFLGMLAVSLIGLAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTLTALIAILFWDTYRWQSLAVMAALYALGAAACLWKVRMSLRSAPPLFEATLAELDKDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EILRR HHHCC >Mature Secondary Structure TDDHSPKLLASLKKLAGTVVSMAQTRLELASVELAEEKERLLGAAFLGMLAVSLIGLAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTLTALIAILFWDTYRWQSLAVMAALYALGAAACLWKVRMSLRSAPPLFEATLAELDKDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EILRR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA