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The map label for this gene is ppdD [C]

Identifier: 17545442

GI number: 17545442

Start: 769004

End: 769489

Strand: Reverse

Name: ppdD [C]

Synonym: RSc0723

Alternate gene names: 17545442

Gene position: 769489-769004 (Counterclockwise)

Preceding gene: 17545443

Following gene: 17545441

Centisome position: 20.71

GC content: 61.32

Gene sequence:

>486_bases
ATGCGCACACACCGTTCGCCCCCCCTGCCCCATCAGCGTGGCTTCACGCTGATCGAGCTGATGATTGTCGTGATCGTCGT
CGCCATCCTGTCGACGATCGCGTATCCGTCCTATACGCAGTTCGTGCAGAAAAGCCGGCGTACGCAGGCCAAGGCCGCGC
TGATGGAAAACATGCAGCTGTTCGAGCGGCACTTCGCGCAAGCGAACACGTATGCCGCCAGCTCCACTGACCTGACCCAC
GCGTGGAACGGGTTCAGGACATATTCGGGCGATGCGCAGACCAGCACCAGCTACCAGATCTCGGCCGTGGGCTGCTCCGG
CAGCGCGAACGTGGACCAGTGCGTCGAACTGCAAGCACAGCCACCCAACAACGGCAAGGACGATCCGACTTGCGGCACGC
TGGTCTATCGCAGCACGGGTGAAAAGCTAAACATCCTTTTGGGGAAATCCGTCCCCGAGTCGCCCACCACGACCGGATGC
TGGTAA

Upstream 100 bases:

>100_bases
ACCACCGAATCGGGAGTCGCCTCGCAGCAGTTGAATTCCCGCATCGGCTGGCGCGAAGTCCGCAACTTCGTCCTGCAGAC
GAACTGACACAGGAGCGATC

Downstream 100 bases:

>100_bases
CGATCATGCGAAGCGATAGCCTCTCTTTTCGCCGCCGGTCCGCGCGGGGTTTCACGCTGCTCGAACTGATGGTGACGATC
GCCATCATCTCGATCATGCT

Product: type-4 fimbrial pilin-like transmembrane protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Type 4 Fimbrial Biogenesis Protein PilE; Type IV Pilin; General Secretion Pathway Protein H; Type IV Pilus Biogenesis Protein PilE; Tfp Pilus Assembly Protein PilE; Type IV Pilus Assembly Protein PilE; Type 4 Fimbrial Biogenesis Transmembrane Protein; Type IV Pilus Assembly Protein Pile; Pilus Assembly Protein; PilE Protein; Prepilin Like Protein; Type IV Pilus Biogenesis Protein; Type-4 Fimbrial Pilin-Related Transmembrane Protein; Type IV Fimbrial Biogenesis Protein; Type IV Pilin PilE; Type IV Pilus-Associated Protein PilV; PilE Type IV Pilus Assembly Protein; Type-4 Fimbrial Pilin-Like Transmembrane Protein; Type-4 Frimbrial Pilin-Related Signal Peptide Protein; Tfp Pilus Assembly Protein; Pilus Assembly Protein PilE; Secretion Protein; Type 4 Fimbrial Biogenesis Signal Peptide Protein; Type IV Pilin Pile Protein; Methylation; Tfp Pilus Assembly Protein PilE-Like Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRTHRSPPLPHQRGFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAALMENMQLFERHFAQANTYAASSTDLTH
AWNGFRTYSGDAQTSTSYQISAVGCSGSANVDQCVELQAQPPNNGKDDPTCGTLVYRSTGEKLNILLGKSVPESPTTTGC
W

Sequences:

>Translated_161_residues
MRTHRSPPLPHQRGFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAALMENMQLFERHFAQANTYAASSTDLTH
AWNGFRTYSGDAQTSTSYQISAVGCSGSANVDQCVELQAQPPNNGKDDPTCGTLVYRSTGEKLNILLGKSVPESPTTTGC
W
>Mature_161_residues
MRTHRSPPLPHQRGFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAALMENMQLFERHFAQANTYAASSTDLTH
AWNGFRTYSGDAQTSTSYQISAVGCSGSANVDQCVELQAQPPNNGKDDPTCGTLVYRSTGEKLNILLGKSVPESPTTTGC
W

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17646; Mature: 17646

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHRSPPLPHQRGFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAALMENMQL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FERHFAQANTYAASSTDLTHAWNGFRTYSGDAQTSTSYQISAVGCSGSANVDQCVELQAQ
HHHHHHHHCCCCCCCCCCHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHEECCC
PPNNGKDDPTCGTLVYRSTGEKLNILLGKSVPESPTTTGCW
CCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRTHRSPPLPHQRGFTLIELMIVVIVVAILSTIAYPSYTQFVQKSRRTQAKAALMENMQL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FERHFAQANTYAASSTDLTHAWNGFRTYSGDAQTSTSYQISAVGCSGSANVDQCVELQAQ
HHHHHHHHCCCCCCCCCCHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHEECCC
PPNNGKDDPTCGTLVYRSTGEKLNILLGKSVPESPTTTGCW
CCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA