| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is envR [C]
Identifier: 17545417
GI number: 17545417
Start: 746423
End: 747217
Strand: Reverse
Name: envR [C]
Synonym: RSc0698
Alternate gene names: 17545417
Gene position: 747217-746423 (Counterclockwise)
Preceding gene: 17545422
Following gene: 17545416
Centisome position: 20.11
GC content: 67.55
Gene sequence:
>795_bases GTGAGTCAGTGGCGAAGCCTGCCCACCGGCTCCGTTGCCGCAGTTGCCGCCGTGACCGATCGAGATCCCGAGTCCTCCAC CAAACGCTGGACCCGCCGCAAGGAAGCCCGCCCGCAGGAACTGGTGGCGGCAGCGATGTCCCTGTTCGTGGCGCGCGGCT TTGCGGCCACGCGGCTGGAAGATGTGGCGGCCGCGGCCGGCGTGTCCAAGGGCACGGTCTATCTGTACTTCGCCAACAAG GTCGAGCTGTTCAAGGCCGTCGTACAGGAAAACCTGCTGCCCGTGCTGGCCGAGGGCGAGGCTCTGATCGACACCTTCGA AGGCAGCAGCGAAGCGCTGCTGCACGAGATCCTGATGGGCTGGTGGGAGATGATCGGCGAGTCACCGGTCTCGGGCCTGA CCAAGCTGCTGATGGCCGAAGCGGGCAACTTTCCCGATCTCGCGCAGTACTACCACGAAGCGGTCATCCAGCGCTGCGAC CGGCTGTTCATGAGCATCCTGGAGCGCGGCATGGCTCGCGGCGAGTTCCGCGAGACCGATATCGACATGACCACACTGGC CCTGGTCGCCCCGATGCTGTTCCTGACGATGTGGAAGCACTCCTTCGGCCCGTGCTCGCACCGGGAACTGGATCCGAAGG CGTTCGTCGCGCACTTGGTCGCGCTGATACTGCACGGCCTGCTGCGCAACCCGGTGCCGGGCACGACGGTCCCGCCGCCC CCGCCGCTGACCTGCCAGCCATGGCGGCCGGCGCCCGCGGACGGCACGGGCACCGGCGAAGGCAACGCGCCATGA
Upstream 100 bases:
>100_bases GCACCACCACATTCGAGACGCATGCTGCGGAGCGGGTCGCATGCCGCTTGACCCGTCCCCCACAGCCTGCGTACATTAAT GACCGAAAAGTAAGTTATCC
Downstream 100 bases:
>100_bases CGATCCGCGCCGGAATGTCCTCCGGACTTGCTAAAATGCCGGGTTTGTCGACAAACCCTCATTCGCTTCGCCTGGAAGGC ATGCCCATGGACATCGAAAA
Product: transcription regulator protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; Transcription Regulator TetR Family; Transcriptional Regulator Protein Tetr/Acrr-Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; TRANSCRIPTIONal REGULATOR PROTEIN TetR/AcrR-Family
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSQWRSLPTGSVAAVAAVTDRDPESSTKRWTRRKEARPQELVAAAMSLFVARGFAATRLEDVAAAAGVSKGTVYLYFANK VELFKAVVQENLLPVLAEGEALIDTFEGSSEALLHEILMGWWEMIGESPVSGLTKLLMAEAGNFPDLAQYYHEAVIQRCD RLFMSILERGMARGEFRETDIDMTTLALVAPMLFLTMWKHSFGPCSHRELDPKAFVAHLVALILHGLLRNPVPGTTVPPP PPLTCQPWRPAPADGTGTGEGNAP
Sequences:
>Translated_264_residues MSQWRSLPTGSVAAVAAVTDRDPESSTKRWTRRKEARPQELVAAAMSLFVARGFAATRLEDVAAAAGVSKGTVYLYFANK VELFKAVVQENLLPVLAEGEALIDTFEGSSEALLHEILMGWWEMIGESPVSGLTKLLMAEAGNFPDLAQYYHEAVIQRCD RLFMSILERGMARGEFRETDIDMTTLALVAPMLFLTMWKHSFGPCSHRELDPKAFVAHLVALILHGLLRNPVPGTTVPPP PPLTCQPWRPAPADGTGTGEGNAP >Mature_263_residues SQWRSLPTGSVAAVAAVTDRDPESSTKRWTRRKEARPQELVAAAMSLFVARGFAATRLEDVAAAAGVSKGTVYLYFANKV ELFKAVVQENLLPVLAEGEALIDTFEGSSEALLHEILMGWWEMIGESPVSGLTKLLMAEAGNFPDLAQYYHEAVIQRCDR LFMSILERGMARGEFRETDIDMTTLALVAPMLFLTMWKHSFGPCSHRELDPKAFVAHLVALILHGLLRNPVPGTTVPPPP PLTCQPWRPAPADGTGTGEGNAP
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28829; Mature: 28697
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQWRSLPTGSVAAVAAVTDRDPESSTKRWTRRKEARPQELVAAAMSLFVARGFAATRLE CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DVAAAAGVSKGTVYLYFANKVELFKAVVQENLLPVLAEGEALIDTFEGSSEALLHEILMG HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHH WWEMIGESPVSGLTKLLMAEAGNFPDLAQYYHEAVIQRCDRLFMSILERGMARGEFRETD HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC IDMTTLALVAPMLFLTMWKHSFGPCSHRELDPKAFVAHLVALILHGLLRNPVPGTTVPPP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PPLTCQPWRPAPADGTGTGEGNAP CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQWRSLPTGSVAAVAAVTDRDPESSTKRWTRRKEARPQELVAAAMSLFVARGFAATRLE CCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DVAAAAGVSKGTVYLYFANKVELFKAVVQENLLPVLAEGEALIDTFEGSSEALLHEILMG HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHH WWEMIGESPVSGLTKLLMAEAGNFPDLAQYYHEAVIQRCDRLFMSILERGMARGEFRETD HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC IDMTTLALVAPMLFLTMWKHSFGPCSHRELDPKAFVAHLVALILHGLLRNPVPGTTVPPP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PPLTCQPWRPAPADGTGTGEGNAP CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA