| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cmcH [H]
Identifier: 17545365
GI number: 17545365
Start: 693476
End: 693796
Strand: Direct
Name: cmcH [H]
Synonym: RSc0646
Alternate gene names: 17545365
Gene position: 693476-693796 (Clockwise)
Preceding gene: 17545364
Following gene: 17545366
Centisome position: 18.66
GC content: 60.12
Gene sequence:
>321_bases ATGCGTTTGCTGGCGATGAAACCCGGCCATGATGGAAATCTGGCCTACATTGCAAACGGGCAGCTCGAATTTTCGTTTGA AGCGGAGAAGGACTCCGGCAATCGCTATGCGCCGATCGGTGCCACCGAGCTGATCGAGGCGATGCGGCACACATCCGAGA TACCCGAGGCGATCGTCATCAGCGGCTGGTCTGCCGGCGTCGATCCCCTGGGGCGACCGATTGGCGCCGGGTACATGGGG CTGGACGGCTTCGTCGTCGAAGGCGTCCTGTTCAGCCGTGAACAAGGCGGATCCAACCCTATGGTTATGGTGAGTGCATG A
Upstream 100 bases:
>100_bases TCGAGTCGGTCATGTTTTTCCTGGGGGCAGGCAAAGGGGATGGCGCAGTGGCGCGAGCGGCGCTCAGCACATTGCGTGGA CTGGCGACCCGGGAGCCATG
Downstream 100 bases:
>100_bases CGATGTTGAGCAGCGTACCGGGATACCGGGCATTGATGGCGGCCCGTGTGATCAGCTCGGGCATCGTCTGGGTGGACTTC ACGCTGATTTTCTCGCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: 3'-hydroxymethylcephem-O-CASE; CCT [H]
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRLLAMKPGHDGNLAYIANGQLEFSFEAEKDSGNRYAPIGATELIEAMRHTSEIPEAIVISGWSAGVDPLGRPIGAGYMG LDGFVVEGVLFSREQGGSNPMVMVSA
Sequences:
>Translated_106_residues MRLLAMKPGHDGNLAYIANGQLEFSFEAEKDSGNRYAPIGATELIEAMRHTSEIPEAIVISGWSAGVDPLGRPIGAGYMG LDGFVVEGVLFSREQGGSNPMVMVSA >Mature_106_residues MRLLAMKPGHDGNLAYIANGQLEFSFEAEKDSGNRYAPIGATELIEAMRHTSEIPEAIVISGWSAGVDPLGRPIGAGYMG LDGFVVEGVLFSREQGGSNPMVMVSA
Specific function: Catalyzes the carbamoylation reaction in the cephamycin biosynthesis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 11227; Mature: 11227
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLAMKPGHDGNLAYIANGQLEFSFEAEKDSGNRYAPIGATELIEAMRHTSEIPEAIVI CEEEECCCCCCCCEEEEECCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHHCCCCEEEE SGWSAGVDPLGRPIGAGYMGLDGFVVEGVLFSREQGGSNPMVMVSA ECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MRLLAMKPGHDGNLAYIANGQLEFSFEAEKDSGNRYAPIGATELIEAMRHTSEIPEAIVI CEEEECCCCCCCCEEEEECCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHHCCCCEEEE SGWSAGVDPLGRPIGAGYMGLDGFVVEGVLFSREQGGSNPMVMVSA ECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7557411 [H]