| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545357
Identifier: 17545357
GI number: 17545357
Start: 684598
End: 685122
Strand: Direct
Name: 17545357
Synonym: RSc0638
Alternate gene names: NA
Gene position: 684598-685122 (Clockwise)
Preceding gene: 17545356
Following gene: 17545359
Centisome position: 18.42
GC content: 60.19
Gene sequence:
>525_bases GTGTTGCTCAAGGGGCAGGTGTCTAGCCGCAAGCGTGTGTTGATCAATGGATGTACTGGCGCGGTTGGCGCAATGGCGGC ACAGCTTGCTATGGCGAACGGCGCGCAGGTAGCGGGCACGTGTAGCCGCACGTCGATGGAGCGCGCAAGAAAGGCCGGTT TGGATCGCATTTTTGATTATGCCGATCCAGATTCCTGGTCCGCGGAGGGACCATTTGATGTGATCTTCGACACCGCTGGC ACGCTACCAGTCGGCCACGGGCTATCGATGCTCAAGCCGAGGGGCGTCTTCGTCGACATCAATCCGACACCGCGCCGCCT GCTGCGAGGCATGTTGACTCGTCGCTACAAACTCGTGTTTGCCACGATGGCTTTGCGGCATCTCGCCGAGATCGCGCAAC TGGCGGCGCAAGGCACCCTGAAGCCGACTATCGGCCTGGAAAAGCCATTCTCCGACGCCGTGGAAACAATCACGGCGGTC GAGCATGGTTTGCGTACTCCGGGCCGGGTGGTCCTTACTTTCTAA
Upstream 100 bases:
>100_bases AACGAATTAGCGGAACGGGACACTAGTCAGGAAGCCGTCGCAGCTCTCTTTTGAAGAGGCAGCTTGCCTGCCGATCCCGT GCGCGACAGCGTGGGCTGCC
Downstream 100 bases:
>100_bases TTCGCGCCCGCCCGGGCTCAAGTCAGGCTTCGTGTGGGCAGCACATCCCTTTAGCAAATGGCCGTCGGTCTACCACCGAC TTCACGGGTTCAGTCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Alcohol Dehydrogenase; Alcohol Dehydrogenase Zinc-Containing Protein
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLLKGQVSSRKRVLINGCTGAVGAMAAQLAMANGAQVAGTCSRTSMERARKAGLDRIFDYADPDSWSAEGPFDVIFDTAG TLPVGHGLSMLKPRGVFVDINPTPRRLLRGMLTRRYKLVFATMALRHLAEIAQLAAQGTLKPTIGLEKPFSDAVETITAV EHGLRTPGRVVLTF
Sequences:
>Translated_174_residues MLLKGQVSSRKRVLINGCTGAVGAMAAQLAMANGAQVAGTCSRTSMERARKAGLDRIFDYADPDSWSAEGPFDVIFDTAG TLPVGHGLSMLKPRGVFVDINPTPRRLLRGMLTRRYKLVFATMALRHLAEIAQLAAQGTLKPTIGLEKPFSDAVETITAV EHGLRTPGRVVLTF >Mature_174_residues MLLKGQVSSRKRVLINGCTGAVGAMAAQLAMANGAQVAGTCSRTSMERARKAGLDRIFDYADPDSWSAEGPFDVIFDTAG TLPVGHGLSMLKPRGVFVDINPTPRRLLRGMLTRRYKLVFATMALRHLAEIAQLAAQGTLKPTIGLEKPFSDAVETITAV EHGLRTPGRVVLTF
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18695; Mature: 18695
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKGQVSSRKRVLINGCTGAVGAMAAQLAMANGAQVAGTCSRTSMERARKAGLDRIFDY CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCC ADPDSWSAEGPFDVIFDTAGTLPVGHGLSMLKPRGVFVDINPTPRRLLRGMLTRRYKLVF CCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHH ATMALRHLAEIAQLAAQGTLKPTIGLEKPFSDAVETITAVEHGLRTPGRVVLTF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MLLKGQVSSRKRVLINGCTGAVGAMAAQLAMANGAQVAGTCSRTSMERARKAGLDRIFDY CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCC ADPDSWSAEGPFDVIFDTAGTLPVGHGLSMLKPRGVFVDINPTPRRLLRGMLTRRYKLVF CCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHH ATMALRHLAEIAQLAAQGTLKPTIGLEKPFSDAVETITAVEHGLRTPGRVVLTF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA