| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545331
Identifier: 17545331
GI number: 17545331
Start: 659170
End: 659748
Strand: Direct
Name: 17545331
Synonym: RSc0612
Alternate gene names: NA
Gene position: 659170-659748 (Clockwise)
Preceding gene: 17545330
Following gene: 17545334
Centisome position: 17.74
GC content: 72.54
Gene sequence:
>579_bases ATGAGTTCGCCTCCCGTACCCGTGTTGCGGCTGCCGGTGCGGCTCAGCCAGCGGCACAAGCGCTGGCTGTATGCGACCGG CGCCGTACTGTGCTGCTCGGGCCTGGGCTGGCTGGTCGCGCATGACCTGCTGGGCGGGCAGGGGCCGTTCGGCGATGCGC CGCATCCGTCCGAGCCCTGGTGGCTGCGCATCCATGGCGCCGCGGCCATGGGCTTCCTGGTGGCGCTGGGCTCGCTGCTG CCCGGCCACGTCGCCCGGGCCTGGCAGATGCGGAGAAATCATCGCTCCGGCCTGTTCATGCTGGTGCTGGCGGCGCTGCT GGTCGCGACCGGATATGGACTGTATTACGCCGGAGACGAACAGACCCGGCCCTGGATCAGCTGCGTGCACTGGCTGCTCG GCGTGGCGGCCGCCGGTGTGGCGCCGCTGCATGTCTATATGGGGCGGCGCAGCGCCATGGCGGAGAGGGGGCCGGGACTG GGTCGGCCCGCCACCGATGTGCCGGAAGCCTCTGCCGGCGCCGGCGTTGCCGGGCAAGCACCACGCCCGGCCGGGCGCGA TGCCGTCCGGCGTGCCTGA
Upstream 100 bases:
>100_bases CGCCCGAGATCCTCGATCGCTGCCACGCGCAGGCCGTGGTGGTCGGCGCGCAGGCCATCGGCATGTGCGGCGCGCCGCTG CTGCGCAGGGCCGACGCGCC
Downstream 100 bases:
>100_bases GCGCATTCCGGATCGCGGCCGGGCAGGACCGGCAAAGCGGCGATGCCGCCGGTCCTGCCCGCGCAACGGCTGAATGCGCC GCGATGGATCAGGCGACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSSPPVPVLRLPVRLSQRHKRWLYATGAVLCCSGLGWLVAHDLLGGQGPFGDAPHPSEPWWLRIHGAAAMGFLVALGSLL PGHVARAWQMRRNHRSGLFMLVLAALLVATGYGLYYAGDEQTRPWISCVHWLLGVAAAGVAPLHVYMGRRSAMAERGPGL GRPATDVPEASAGAGVAGQAPRPAGRDAVRRA
Sequences:
>Translated_192_residues MSSPPVPVLRLPVRLSQRHKRWLYATGAVLCCSGLGWLVAHDLLGGQGPFGDAPHPSEPWWLRIHGAAAMGFLVALGSLL PGHVARAWQMRRNHRSGLFMLVLAALLVATGYGLYYAGDEQTRPWISCVHWLLGVAAAGVAPLHVYMGRRSAMAERGPGL GRPATDVPEASAGAGVAGQAPRPAGRDAVRRA >Mature_191_residues SSPPVPVLRLPVRLSQRHKRWLYATGAVLCCSGLGWLVAHDLLGGQGPFGDAPHPSEPWWLRIHGAAAMGFLVALGSLLP GHVARAWQMRRNHRSGLFMLVLAALLVATGYGLYYAGDEQTRPWISCVHWLLGVAAAGVAPLHVYMGRRSAMAERGPGLG RPATDVPEASAGAGVAGQAPRPAGRDAVRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20404; Mature: 20273
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPPVPVLRLPVRLSQRHKRWLYATGAVLCCSGLGWLVAHDLLGGQGPFGDAPHPSEPW CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCE WLRIHGAAAMGFLVALGSLLPGHVARAWQMRRNHRSGLFMLVLAALLVATGYGLYYAGDE EEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCC QTRPWISCVHWLLGVAAAGVAPLHVYMGRRSAMAERGPGLGRPATDVPEASAGAGVAGQA CCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PRPAGRDAVRRA CCCCCCHHHCCC >Mature Secondary Structure SSPPVPVLRLPVRLSQRHKRWLYATGAVLCCSGLGWLVAHDLLGGQGPFGDAPHPSEPW CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCE WLRIHGAAAMGFLVALGSLLPGHVARAWQMRRNHRSGLFMLVLAALLVATGYGLYYAGDE EEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCC QTRPWISCVHWLLGVAAAGVAPLHVYMGRRSAMAERGPGLGRPATDVPEASAGAGVAGQA CCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PRPAGRDAVRRA CCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA