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The map label for this gene is 17545257

Identifier: 17545257

GI number: 17545257

Start: 580686

End: 581708

Strand: Reverse

Name: 17545257

Synonym: RSc0538

Alternate gene names: NA

Gene position: 581708-580686 (Counterclockwise)

Preceding gene: 17545260

Following gene: 17545256

Centisome position: 15.65

GC content: 72.14

Gene sequence:

>1023_bases
ATGGCCCGTCCTGGCGCAGGAGACACCAAGAACCGCATTCTGGAAGCCACCGAACTGCTGTTCATCGAGTTCGGCTACGA
GGCGATGTCGTTGCGGCAGATCACGGCGCGCGCCAAGGTCAACCTGGCCGCCGTCAACTATCACTTCGGCAGCAAGGAAG
CGCTGATGCAGTCGGTGCTCGGCCGCCGGCTCGACCCGCTCAACACGCGCCGGCTGGCGCTGCTGACCGCGTGCGAGGAG
CGCTGGCCGCAGCGGCTGAGCTGCGAGCATGTGCTGGGCGCGCTGTTCGTGCCCGCGCTGCAGATGGCGCGCACCCCCGA
CACCGGCGGCCCCGCCTTCCTGCGGCTGATGGGCCGCGTGTATTCCGATACGTCGCCGTTCGTGCAGAACTATCTGCTCG
GCCACTACGCGCCCGTCTTCGACCGCTTCTTCGAAGCGTTCTCGCGCACGCTGCCGGGCCTTCCCCGCGCCGAGCTCGGC
TGGCGGCTGCATTTCGCGCTCAAGGCGCTGGCCGGCGTGCTGGCCGGCGATGACCTCAACAACCTGCTGCCGCTGTTCAC
GCAGGGCAAGCCGATGAACGATGCGACCCTGCTGGCGCGCCTGACCGCGCTGGTGGTGGCCACGCTCAACGCGCCGCTGC
CGGGCGACGAGGCGGGCGCGCTGGACCAGGTGGTGGAACTGGCCGAGGTCCAGCCCCCCGCATCCACGGCGCCGGCGGAC
GACGATTCCACCGGCAACGGGGGCGGCGGCGCGGACCGAGGCACCGAGCGCGCCGGCAGCCCGCCGCATGCCGCACCCTT
CTCCGGCGACCCGTTCGGCCGGACCGCGGCATCGCGCGCCGACGCCGGGGCCGCACGCAACGACACAGCCGACGACGACA
GCGACAACGTGGATGGCAGCAGCACCGCGCCGCAGGCCACACCCTCCGCGCGGACCCGTGCCCTGGCGATCCGCCGCAGC
AACGCGGCCCGCGCCATCTTCCCGGCCAATCCGATGCGGCCCTGGCGCAGCCCCGGCGCCTGA

Upstream 100 bases:

>100_bases
TGCCCGCACCACCCAATACATACGTTTGAATCGTACGTTCGAGCGCTGCACCGCAGCAATGGAACGCGTGATCGGCCCCC
AAAACAACGAGGCAGGAGAC

Downstream 100 bases:

>100_bases
GCCCGTGCGGGGCCTGCGGATGCGCCGCTCACCGGATGCCGGCGGGCAAGGCATCCGGCCCCACGAACGCATGGACCGGA
GACCATCATGACGATCTGGA

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; Transcliptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MARPGAGDTKNRILEATELLFIEFGYEAMSLRQITARAKVNLAAVNYHFGSKEALMQSVLGRRLDPLNTRRLALLTACEE
RWPQRLSCEHVLGALFVPALQMARTPDTGGPAFLRLMGRVYSDTSPFVQNYLLGHYAPVFDRFFEAFSRTLPGLPRAELG
WRLHFALKALAGVLAGDDLNNLLPLFTQGKPMNDATLLARLTALVVATLNAPLPGDEAGALDQVVELAEVQPPASTAPAD
DDSTGNGGGGADRGTERAGSPPHAAPFSGDPFGRTAASRADAGAARNDTADDDSDNVDGSSTAPQATPSARTRALAIRRS
NAARAIFPANPMRPWRSPGA

Sequences:

>Translated_340_residues
MARPGAGDTKNRILEATELLFIEFGYEAMSLRQITARAKVNLAAVNYHFGSKEALMQSVLGRRLDPLNTRRLALLTACEE
RWPQRLSCEHVLGALFVPALQMARTPDTGGPAFLRLMGRVYSDTSPFVQNYLLGHYAPVFDRFFEAFSRTLPGLPRAELG
WRLHFALKALAGVLAGDDLNNLLPLFTQGKPMNDATLLARLTALVVATLNAPLPGDEAGALDQVVELAEVQPPASTAPAD
DDSTGNGGGGADRGTERAGSPPHAAPFSGDPFGRTAASRADAGAARNDTADDDSDNVDGSSTAPQATPSARTRALAIRRS
NAARAIFPANPMRPWRSPGA
>Mature_339_residues
ARPGAGDTKNRILEATELLFIEFGYEAMSLRQITARAKVNLAAVNYHFGSKEALMQSVLGRRLDPLNTRRLALLTACEER
WPQRLSCEHVLGALFVPALQMARTPDTGGPAFLRLMGRVYSDTSPFVQNYLLGHYAPVFDRFFEAFSRTLPGLPRAELGW
RLHFALKALAGVLAGDDLNNLLPLFTQGKPMNDATLLARLTALVVATLNAPLPGDEAGALDQVVELAEVQPPASTAPADD
DSTGNGGGGADRGTERAGSPPHAAPFSGDPFGRTAASRADAGAARNDTADDDSDNVDGSSTAPQATPSARTRALAIRRSN
AARAIFPANPMRPWRSPGA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36212; Mature: 36081

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPGAGDTKNRILEATELLFIEFGYEAMSLRQITARAKVNLAAVNYHFGSKEALMQSVL
CCCCCCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHH
GRRLDPLNTRRLALLTACEERWPQRLSCEHVLGALFVPALQMARTPDTGGPAFLRLMGRV
HHCCCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
YSDTSPFVQNYLLGHYAPVFDRFFEAFSRTLPGLPRAELGWRLHFALKALAGVLAGDDLN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
NLLPLFTQGKPMNDATLLARLTALVVATLNAPLPGDEAGALDQVVELAEVQPPASTAPAD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
DDSTGNGGGGADRGTERAGSPPHAAPFSGDPFGRTAASRADAGAARNDTADDDSDNVDGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
STAPQATPSARTRALAIRRSNAARAIFPANPMRPWRSPGA
CCCCCCCCCHHHHHHEEECCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ARPGAGDTKNRILEATELLFIEFGYEAMSLRQITARAKVNLAAVNYHFGSKEALMQSVL
CCCCCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHH
GRRLDPLNTRRLALLTACEERWPQRLSCEHVLGALFVPALQMARTPDTGGPAFLRLMGRV
HHCCCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
YSDTSPFVQNYLLGHYAPVFDRFFEAFSRTLPGLPRAELGWRLHFALKALAGVLAGDDLN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
NLLPLFTQGKPMNDATLLARLTALVVATLNAPLPGDEAGALDQVVELAEVQPPASTAPAD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
DDSTGNGGGGADRGTERAGSPPHAAPFSGDPFGRTAASRADAGAARNDTADDDSDNVDGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
STAPQATPSARTRALAIRRSNAARAIFPANPMRPWRSPGA
CCCCCCCCCHHHHHHEEECCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA